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13_1_20cm_4_scaffold_611

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_611_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(246..947)
-----------------
DNA (702bp)
protein (234aa)
putative CoA transferase subunit B; K01040 glutaconate CoA-transferase, subunit B [EC:2.8.3.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Coenzyme A transferase id=3548792 bin=GWF2_Methylomirabilis_70_14 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CoA transferase, subunit B
13_1_20cm_4_scaffold_611_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(976..1422)
-----------------
DNA (447bp)
protein (149aa)
coenzyme A transferase; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative CoA transferase, subunit A id=4853986 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutaconate CoA-transferase, subunit A
13_1_20cm_4_scaffold_611_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(1471..1779)
-----------------
DNA (309bp)
protein (103aa)
Coenzyme A transferase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDT5_9FIRM
putative coenzyme A transferase, subunit A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
coenzyme A transferase
13_1_20cm_4_scaffold_611_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1875..2219)
-----------------
DNA (345bp)
protein (115aa)
ferredoxin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4638245 bin=GWC2_Methylomirabilis_70_16 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
2Fe-2S ferredoxin
13_1_20cm_4_scaffold_611_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2245..3180
-----------------
DNA (936bp)
protein (312aa)
polyamine-transporting ATPase (EC:3.6.3.31); K09687 antibiotic transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
polyamine-transporting ATPase (EC:3.6.3.31)
Polyamine-transporting ATPase id=2419362 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_611_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3164..3958
-----------------
DNA (795bp)
protein (265aa)
ABC transporter; K09686 antibiotic transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
ABC-2 type transporter id=2419360 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_1_20cm_4_scaffold_611_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3963..4577
-----------------
DNA (615bp)
protein (205aa)
dimethylmenaquinone methyltransferase Tax=GWA2_Rokubacteria_73_35_curated
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase id=2419358 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces sp. AA4 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
dimethylmenaquinone methyltransferase
13_1_20cm_4_scaffold_611_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4614..5540)
-----------------
DNA (927bp)
protein (309aa)
hypothetical protein; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
transketolase; K00615 transketolase [EC:2.2.1.1] id=14627851 bin=bin7_NC10_sister species=Anaeromusa acidaminophila genus=Anaeromusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
transketolase, C-terminal subunit
13_1_20cm_4_scaffold_611_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(5540..6454)
-----------------
DNA (915bp)
protein (305aa)
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] id=14627850 bin=bin7_NC10_sister species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 rbh
transketolase
13_1_20cm_4_scaffold_611_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6454..8010)
-----------------
DNA (1557bp)
protein (519aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14627849 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_611_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(8010..9578)
-----------------
DNA (1569bp)
protein (523aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627421 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 rbh
hypothetical protein
13_1_20cm_4_scaffold_611_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(9589..10785)
-----------------
DNA (1197bp)
protein (399aa)
molybdopterin-guanine dinucleotide biosynthesis protein B; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Molybdenum cofactor synthesis domain protein id=3926923 bin=GWC2_Methylomirabilis_70_16 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdenum cofactor synthesis domain-containing protein
13_1_20cm_4_scaffold_611_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(10782..11627)
-----------------
DNA (846bp)
protein (282aa)
Putative Phage integrase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8R6_9BACT
putative phage integrase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative phage integrase
Displaying 13 items

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