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13_1_20cm_4_scaffold_6378

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_6378_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3..2198)
DNA (2196bp) protein (732aa)
transketolase central region; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] Tax=GWA2_Rokubacteria_73_35_curated
Transketolase central region id=3577277 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transketolase
13_1_20cm_4_scaffold_6378_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2832..3614)
DNA (783bp) protein (261aa)
ABC transporter-like protein Tax=GWA2_Rokubacteria_73_35_curated
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family id=3577283 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
ABC-type branched-chain amino acid transport systems, ATPase component
13_1_20cm_4_scaffold_6378_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3703..4836)
DNA (1134bp) protein (378aa)
inner-membrane translocator Tax=CSP1_6_Rokubacteria
inner-membrane translocator id=14625865 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
inner-membrane translocator
13_1_20cm_4_scaffold_6378_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(4833..5711)
DNA (879bp) protein (293aa)
livK1; high-affinity branched-chain amino acid ABC transporter permease Tax=CSP1_6_Rokubacteria
livK1; high-affinity branched-chain amino acid ABC transporter permease id=14625864 bin=bin7_NC10_sister species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 rbh
inner-membrane translocator
13_1_20cm_4_scaffold_6378_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(5769..6983)
DNA (1215bp) protein (405aa)
livK3; ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
livK3; ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein id=14625863 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
livK3; ABC transporter periplasmic protein
13_1_20cm_4_scaffold_6378_6
RLO_PLX_64_10, Bacteria

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7091..7501
DNA (411bp) protein (137aa)
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_1_20cm_4_scaffold_6378_7
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7520..8890
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036074FB
Acid phosphatase {ECO:0000313|EMBL:KIL98063.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum m
acid phosphatase
13_1_20cm_4_scaffold_6378_8
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8912..9208)
DNA (297bp) protein (99aa)
Histidine triad (HIT) family hydrolase n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AF84_GEOSK
HIT domain protein {ECO:0000313|EMBL:GAM09858.1}; TaxID=1266765 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
histidine triad (HIT) family hydrolase
13_1_20cm_4_scaffold_6378_9

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comp(9159..10700)
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003710D74
Marine sediment metagenome DNA, contig: S03H2_C01213 {ECO:0000313|EMBL:GAH30185.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
extracellular solute-binding protein
Displaying 9 items

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