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13_1_20cm_4_scaffold_658

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_658_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..2436
DNA (2436bp) protein (812aa)
Acriflavin resistance protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G756_GEOUR
Acriflavin resistance protein {ECO:0000313|EMBL:ABQ27624.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter ura
acriflavin resistance protein
13_1_20cm_4_scaffold_658_2
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2490..3185
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNE1_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:AHY51519.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
hypothetical protein
13_1_20cm_4_scaffold_658_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

3218..3496
DNA (279bp) protein (93aa)
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein id=14428809 bin=bin3_NC10 species=Methylobacillus flagellatus genus=Methylobacillus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_658_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

3535..4176
DNA (642bp) protein (214aa)
HAD ATPase, P-type, IC family protein Tax=CSP1_6_Rokubacteria
HAD ATPase, P-type, IC family protein id=14626962 bin=bin7_NC10_sister species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
phosphatidic acid phosphatase
13_1_20cm_4_scaffold_658_5
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4189..5574
DNA (1386bp) protein (462aa)
hypothetical protein Tax=RBG_16_Gammaproteobacteria_57_12_curated
hypothetical protein
hypothetical protein id=14428800 bin=bin3_NC10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
13_1_20cm_4_scaffold_658_6
unknown

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comp(5589..5831)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_20cm_4_scaffold_658_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5864..6493)
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:EGP55458.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
13_1_20cm_4_scaffold_658_8
CSP1_5_NC10, NC10, Bacteria

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comp(6490..7224)
DNA (735bp) protein (245aa)
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein id=14428808 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 rbh
hypothetical protein
13_1_20cm_4_scaffold_658_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7239..7496)
DNA (258bp) protein (86aa)
hypothetical protein Tax=CSP1_5_NC10
13_1_20cm_4_scaffold_658_10
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7879..8151
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00036C4A0F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
hypothetical protein
13_1_20cm_4_scaffold_658_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8151..8813
DNA (663bp) protein (221aa)
Putative two-component transcriptional regulator n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AT00_AZOBR
Putative two-component transcriptional regulator {ECO:0000313|EMBL:CCD00561.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.
putative two-component transcriptional regulator
13_1_20cm_4_scaffold_658_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8810..10162
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; A
Two-component sensor histidine kinase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NZI1_AZOS1 rbh
hypothetical protein
13_1_20cm_4_scaffold_658_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10237..11562
DNA (1326bp) protein (442aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWC2_Rokubacteria_70_16_curated
Acetolactate synthase id=4736650 bin=GWC2_Methylomirabilis_70_16 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_658_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11505..11741
DNA (237bp) protein (79aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=GWA2_Rokubacteria_73_35_curated
Probable acetolactate synthase large subunit id=4143235 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine pyrophosphate protein domain-containing protein TPP-binding protein
13_1_20cm_4_scaffold_658_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12195..13481
DNA (1287bp) protein (429aa)
Natural resistance-associated macrophage protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SI9_SOLUE
natural resistance-associated macrophage protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
natural resistance-associated macrophage protein
13_1_20cm_4_scaffold_658_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13478..13996
DNA (519bp) protein (173aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4856180 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_658_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14017..14802)
DNA (786bp) protein (262aa)
PhzF family phenazine biosynthesis protein; K06998 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phenazine biosynthesis protein PhzF family id=1884744 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
PhzF family phenazine biosynthesis protein
13_1_20cm_4_scaffold_658_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14917..15987
DNA (1071bp) protein (357aa)
type 11 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase family protein id=4871443 bin=GWC2_Methylomirabilis_70_24 species=Saccharomonospora cyanea genus=Saccharomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
type 11 methyltransferase
13_1_20cm_4_scaffold_658_19
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

15996..17153
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6DABF
hypothetical protein Tax=CG_Arma_02
hypothetical protein
13_1_20cm_4_scaffold_658_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17157..17750
DNA (594bp) protein (198aa)
type 11 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase type 11 id=1884749 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type 11 methyltransferase
13_1_20cm_4_scaffold_658_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17819..18184)
DNA (366bp) protein (122aa)
Hydrogenase, large subunit-like protein (HycE-like) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML63_9BACT
hydrogenase, large subunit-like protein (HycE-like) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hydrogenase, large subunit-like protein (HycE-like)
13_1_20cm_4_scaffold_658_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18216..19013)
DNA (798bp) protein (266aa)
Hydrogenase, large subunit-like protein (HycE-like) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML63_9BACT
hydrogenase, large subunit-like protein (HycE-like) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hydrogenase, large subunit-like protein (HycE-like)
13_1_20cm_4_scaffold_658_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19128..20549)
DNA (1422bp) protein (474aa)
hyfF; hydrogenase-4 component F (EC:1.-.-.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hyfF; hydrogenase-4 component F (EC:1.-.-.-)
Hydrogenase-4 component F n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML62_9BACT
13_1_20cm_4_scaffold_658_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20546..20983)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML61_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_4_scaffold_658_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20980..21954)
DNA (975bp) protein (325aa)
Similar to membrane-bound [NiFe]-hydrogenase-3, subunit D n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML60_9BACT
hycD; membrane-bound [NiFe]-hydrogenase-3, subunit D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hycD; membrane-bound [NiFe]-hydrogenase-3, subunit D
13_1_20cm_4_scaffold_658_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21951..23861)
DNA (1911bp) protein (637aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML59_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_4_scaffold_658_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23861..24076)
DNA (216bp) protein (72aa)
Ni,Fe-hydrogenase III small subunit n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TU47_PHAFV
Ni,Fe-hydrogenase III small subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ni,Fe-hydrogenase III small subunit
Displaying 27 items

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