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13_1_20cm_4_scaffold_682

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_682_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1..801)
DNA (801bp) protein (267aa)
magnesium and cobalt transport protein CorA; K03284 magnesium transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Magnesium and cobalt transport protein CorA id=4810548 bin=GWC2_Methylomirabilis_70_16 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
magnesium and cobalt transport protein CorA
13_1_20cm_4_scaffold_682_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(798..2075)
DNA (1278bp) protein (426aa)
amino acid transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Amino acid/polyamine/organocation transporter, APC superfamily id=4998223 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid transporter
13_1_20cm_4_scaffold_682_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2116..2340)
DNA (225bp) protein (75aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4998222 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_682_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2452..3855)
DNA (1404bp) protein (468aa)
protoporphyrinogen oxidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protoporphyrinogen oxidase id=4998220 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
protoporphyrinogen oxidase
13_1_20cm_4_scaffold_682_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3852..4781)
DNA (930bp) protein (310aa)
ferrochelatase (EC:4.99.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ferrochelatase (EC:4.99.1.1)
Ferrochelatase id=4998219 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_682_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4778..5857)
DNA (1080bp) protein (360aa)
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uroporphyrinogen decarboxylase id=4216374 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase
13_1_20cm_4_scaffold_682_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5862..7361
DNA (1500bp) protein (500aa)
hypothetical protein; K01576 benzoylformate decarboxylase [EC:4.1.1.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase id=3713089 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_682_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7424..8509
DNA (1086bp) protein (362aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3713094 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_20cm_4_scaffold_682_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8529..9470
DNA (942bp) protein (314aa)
luciferase-like monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
Luciferase-like monooxygenase id=4216381 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
luciferase-like monooxygenase
13_1_20cm_4_scaffold_682_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9484..10767
DNA (1284bp) protein (428aa)
hypothetical protein; K09927 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=3716770 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ycaQ; protein of unknown function DUF1006
13_1_20cm_4_scaffold_682_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10770..11264)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRP6_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_4_scaffold_682_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11522..12658
DNA (1137bp) protein (379aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
citrate synthase (EC:2.3.3.1)
Citrate synthase id=3963832 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_682_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12704..14674
DNA (1971bp) protein (657aa)
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acnA; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase id=3841313 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_682_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

14757..15854
DNA (1098bp) protein (366aa)
PrpF family protein; K09788 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
AcnD-accessory protein PrpF id=3841322 bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_20cm_4_scaffold_682_15
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

16043..16828
DNA (786bp) protein (262aa)
Response regulator receiver protein n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3HD15_ILYPC
Response regulator receiver protein {ECO:0000313|EMBL:ADO84071.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (strain
response regulator receiver protein
Displaying 15 items

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