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13_1_20cm_4_scaffold_831

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_831_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
beta-ketoacyl-acyl-carrier-protein synthase II (EC:2.3.1.179); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-ketoacyl synthase id=3870372 bin=GWF2_Methylomirabilis_70_14 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-ketoacyl synthase
13_1_20cm_4_scaffold_831_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(788..1963)
DNA (1176bp) protein (392aa)
Beta-ketoacyl synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=GWA2_Rokubacteria_70_23_curated
3-oxoacyl-ACP synthase (EC:2.3.1.179)
Beta-ketoacyl synthase id=3713926 bin=GWC2_Methylomirabilis_70_16 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_831_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1960..2235)
DNA (276bp) protein (92aa)
hypothetical protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein; K02078 acyl carrier protein id=14627962 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_831_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2243..3034)
DNA (792bp) protein (264aa)
beta-ketoacyl synthase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Probable 3-oxoacyl-[acyl-carrier-protein] synthase II id=3713929 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces violaceusniger genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-ACP synthase
13_1_20cm_4_scaffold_831_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3031..4194)
DNA (1164bp) protein (388aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-ACP synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 id=3713931 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_831_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4296..5129)
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=14627958 bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_831_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

5171..6157
DNA (987bp) protein (329aa)
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
dihydroorotate dehydrogenase (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=14627933 bin=bin7_NC10_sister species=Mycobacterium sp. 155 genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
pyrD; dihydroorotate dehydrogenase PyrD
13_1_20cm_4_scaffold_831_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

6490..6732
DNA (243bp) protein (81aa)
id=4430353 Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
id=14627932 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_831_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6739..7188)
DNA (450bp) protein (150aa)
putative glyoxalase; K07104 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative glyoxalase; K07104 id=14627931 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative glyoxalase
13_1_20cm_4_scaffold_831_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7194..7868)
DNA (675bp) protein (225aa)
DNA repair protein RadC; K03630 DNA repair protein RadC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
DNA repair protein RadC; K03630 DNA repair protein RadC id=14627930 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
DNA repair protein RadC
13_1_20cm_4_scaffold_831_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7943..8443
DNA (501bp) protein (167aa)
amidase Tax=GWA2_Rokubacteria_70_23_curated
Amidase id=4748893 bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
13_1_20cm_4_scaffold_831_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8472..8921)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07K98_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:ABJ07636.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" sourc
hypothetical protein
13_1_20cm_4_scaffold_831_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8941..9795)
DNA (855bp) protein (285aa)
putative beta-lactamase Tax=GWC2_Rokubacteria_70_16_curated
Putative beta-lactamase id=4412858 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium sp. S23321 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative beta-lactamase
13_1_20cm_4_scaffold_831_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9792..10835)
DNA (1044bp) protein (348aa)
luciferase-like monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
luciferase-like monooxygenase id=4793474 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
luciferase-like monooxygenase
13_1_20cm_4_scaffold_831_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10843..11616)
DNA (774bp) protein (258aa)
enoyl-CoA hydratase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
luciferase-like monooxygenase id=4793474 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
enoyl-CoA hydratase/isomerase
13_1_20cm_4_scaffold_831_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11633..12349)
DNA (717bp) protein (239aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=4793461 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_831_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12407..12889)
DNA (483bp) protein (161aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein SclubJA_18268 id=4793458 bin=GWA2_Methylomirabilis_73_35 species=SAR324 cluster bacterium JCVI-SC AAA005 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_831_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12954..14039
DNA (1086bp) protein (362aa)
FMN-dependent alpha-hydroxy acid dehydrogenase glycolate oxidase (EC:1.1.3.15); K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein; Glycolate oxidase id=3831002 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein
13_1_20cm_4_scaffold_831_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14188..14394
DNA (207bp) protein (69aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=4793454 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_831_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14384..15772
DNA (1389bp) protein (463aa)
Amidase (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Amidase (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=4793452 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_831_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

15787..16410
DNA (624bp) protein (208aa)
nitroreductase Tax=GWA2_Rokubacteria_73_35_curated
Nitroreductase id=4793450 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nitroreductase
13_1_20cm_4_scaffold_831_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16465..18006
DNA (1542bp) protein (514aa)
aor6; tungsten-containing aldehyde ferredoxin oxidoreductase Aor (EC:1.2.7.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aldehyde:ferredoxin oxidoreductase id=14627822 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
aldehyde:ferredoxin oxidoreductase
Displaying 22 items

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