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13_1_20cm_4_scaffold_835

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_835_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..1367)
DNA (1365bp) protein (455aa)
malate synthase A (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9] Tax=GWA2_Rokubacteria_73_35_curated
aceB; Malate synthase (EC:2.3.3.9)
Malate synthase id=2216081 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_835_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1478..1789
DNA (312bp) protein (104aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2216080 bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_835_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1810..2196
DNA (387bp) protein (129aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein id=2216079 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_835_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2196..2498
DNA (303bp) protein (101aa)
antibiotic biosynthesis monooxygenase Tax=GWA2_Rokubacteria_73_35_curated
Antibiotic biosynthesis monooxygenase id=2216078 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
antibiotic biosynthesis monooxygenase
13_1_20cm_4_scaffold_835_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2477..3835)
DNA (1359bp) protein (453aa)
major facilitator superfamily protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Major facilitator superfamily MFS_1 id=2216074 bin=GWA2_Methylomirabilis_73_35 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator superfamily protein
13_1_20cm_4_scaffold_835_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3854..5893
DNA (2040bp) protein (680aa)
molybdopterin oxidoreductase Tax=GWA2_Rokubacteria_73_35_curated
Putative molybdopterin oxidoreductase id=2216073 bin=GWA2_Methylomirabilis_73_35 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
anaerobic dehydrogenase
13_1_20cm_4_scaffold_835_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5890..7389
DNA (1500bp) protein (500aa)
radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Radical SAM domain protein id=2216072 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Acidiphilium taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein
13_1_20cm_4_scaffold_835_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7445..10219)
DNA (2775bp) protein (925aa)
Protein export membrane protein, SecD/SecF family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=2216071 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
Protein export membrane protein, SecD/SecF family
13_1_20cm_4_scaffold_835_9
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

10326..11354
DNA (1029bp) protein (343aa)
Tax=RBG_16_Chloroflexi_51_16_curated
13_1_20cm_4_scaffold_835_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11284..11775)
DNA (492bp) protein (164aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein id=2224572 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_835_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11811..12254)
DNA (444bp) protein (148aa)
Mce-related protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Mce-related protein id=14625628 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Mce-related protein
13_1_20cm_4_scaffold_835_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(12254..12874)
DNA (621bp) protein (207aa)
ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative ABC transporter (ATP-binding protein) id=3917310 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_835_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(13016..13810)
DNA (795bp) protein (265aa)
toluene tolerance protein Ttg2B; K02066 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
yrbE; toluene ABC transporter subunit membrane protein id=14625626 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
yrbE; toluene ABC transporter subunit membrane protein
13_1_20cm_4_scaffold_835_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(13807..15726)
DNA (1920bp) protein (640aa)
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase id=2224621 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
13_1_20cm_4_scaffold_835_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15755..16495
DNA (741bp) protein (247aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Membrane protein-like protein id=2224622 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_835_16
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

16492..17514
DNA (1023bp) protein (341aa)
radical SAM protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Fe-S protein, radical SAM family id=3818235 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
radical SAM domain-containing protein
13_1_20cm_4_scaffold_835_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17522..17872
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Radical SAM domain protein id=2224623 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_835_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17869..18561
DNA (693bp) protein (231aa)
nucleoside phosphorylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=2224624 bin=GWA2_Methylomirabilis_73_35 species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nucleoside phosphorylase
13_1_20cm_4_scaffold_835_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19658..20437
DNA (780bp) protein (260aa)
squalene/phytoene synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
squalene/phytoene synthase id=14625618 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
squalene/phytoene synthase
Displaying 19 items

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