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13_1_20cm_4_scaffold_134_13

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: comp(13111..13755)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 206.0
  • Bit_score: 313
  • Evalue 2.70e-82
Pseudouridine synthase id=3333767 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 211.0
  • Bit_score: 300
  • Evalue 1.70e-78
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 205.0
  • Bit_score: 202
  • Evalue 1.30e-49

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGGTCACGCGGAACCTCGCCACCCTCGCCGATCCCGACGCCGACCGGATCACCGTCGACGGTCGGCCGTTGCCGCCGCCCGAGGCGAGACACTACCTCCTCCTCAACAAGCCTCGCGGCTACGTCACCACGCTCTCCGACCCCCAGGGCCGTCCCGTCGTCGCGGACCTCGTCGACGTCGGCGCGCGCCTCTACCCGGTCGGGCGGCTCGACTGGGACGTCGAGGGCGCACTCCTTCTCACCAACGACGGAGCCTTGACCCACCGGCTCCTCCACCCGCGCTACGGGCTCCCGCGCGTGTACGAGGCGGAGGTGGAGGGCCGCGTGGCGCCGGGGGCGCTCGCGCGCTGGCGTCGCGGCGCCGTGCTCGACGACGGGCCGGCGACGCCCGTCGCGGTCGAGCTCGTGCGCGCGCGCGCCGACGCGAGTCGTCTCCGGCTGACCTTCACCGAGGGGCGCAAGCACGAGGTCAAGCGCTACTGCCAGGCTCTCGGCCACCCCGTCGTGCGGCTCCGGCGGGTCGCCTTCGGCCCGGTGGCGCTCGGCGCCCTCGCGCCCGGCGCTCTTCGCCGGCTCACCCCGCGTGAGCTCGCCGCGCTGCGGGCGGCGGTCGCCGATCGCGCCGGCGGGCGGCGCGAGAGGTGA
PROTEIN sequence
Length: 215
VVTRNLATLADPDADRITVDGRPLPPPEARHYLLLNKPRGYVTTLSDPQGRPVVADLVDVGARLYPVGRLDWDVEGALLLTNDGALTHRLLHPRYGLPRVYEAEVEGRVAPGALARWRRGAVLDDGPATPVAVELVRARADASRLRLTFTEGRKHEVKRYCQALGHPVVRLRRVAFGPVALGALAPGALRRLTPRELAALRAAVADRAGGRRER*