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13_1_20cm_4_scaffold_178_25

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: comp(22935..23681)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 202.0
  • Bit_score: 303
  • Evalue 2.40e-79
Transcription-repair coupling factor id=4980429 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 202.0
  • Bit_score: 301
  • Evalue 8.70e-79
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 183.0
  • Bit_score: 112
  • Evalue 1.60e-22

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCTGAGGGACTGGTCGGCCTTTCACGTCCTGGCGAAGACCTTCGCCGAGGGACCCGTGTGCCTGCGCATCGCCGGGCTGACTGGAGCCGCCCGCGCCCTTGCCGTCGCCGAGCTCCTCCAGGCCCACCCGCGTCCCGCGCTGGTCCTCGTGGAGTCGATGACCGACGCCCATCACTGGACCCAGGACCTCAAATTCTTCGGCGCGCCCGCGCTCGAGTTTCCCGGGCGCGAGCCCCGGCTCTGGCGCGGCGGGCGTCAGCGGGAGGCGGACGCCGAGCGCGCCGTCATCTGCCGGCGGCTCGCCGCGGGCGAGCCCGTGGTGGTCGTCGTGACCCCCGAGGCGCTCGACGCCGAGATCGTCGCGCCAGGCGATTTCGCGTCGCGCACGCTGCGGCTCGCCAAGGGCGACTCCCTGGACCGCGAGCTCCTGCTCGAGGCGCTCGAGCGCGCCGGCTACGAGCGCGTCGACACCGTGGTCGAGGTCGGACAGTGGAGCCCCCGCGGCGGCATCGTCGATGTGTTCTCGCCGAGCCACGCGAGCCCCGCACGGGTCGAGTTCTTCGGCGACGAGATCGAGTCGATCAGGCTTTTCGACCCCCCCGCGTGCTCGACGCGACCCGCGAGGACGCGCCGGCGAGCCCGCCTCTCCGCGAGCGACTCGCCGGGCGCCAGCTGGTCGAGCTCTCGCTCGTGGCCGGCACGTCGAGCGCACAGGTGGGAGCCCTGCCGGAGGCCGTGGAGGTAA
PROTEIN sequence
Length: 249
MLRDWSAFHVLAKTFAEGPVCLRIAGLTGAARALAVAELLQAHPRPALVLVESMTDAHHWTQDLKFFGAPALEFPGREPRLWRGGRQREADAERAVICRRLAAGEPVVVVVTPEALDAEIVAPGDFASRTLRLAKGDSLDRELLLEALERAGYERVDTVVEVGQWSPRGGIVDVFSPSHASPARVEFFGDEIESIRLFDPPACSTRPARTRRRARLSASDSPGASWSSSRSWPARRAHRWEPCRRPWR*