ggKbase home page
Advanced Search
Search Help

13_1_20cm_4_scaffold_292_10

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: 8984..13324

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
RHS repeat-associated core domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 932.0
  • Bit_score: 656
  • Evalue 6.60e-185
Rhs family protein id=3847372 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 942.0
  • Bit_score: 654
  • Evalue 2.30e-184
YVTN family beta-propeller repeat protein similarity KEGG
DB: KEGG
  • Identity: 27.7
  • Coverage: 999.99
  • Bit_score: 295
  • Evalue 7.80e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 4341
ATGAGACGGCTCGTAGTCATCGGCCCGGTCGTGCTGGGATTGCTCGCCTTCACAGTCGAGGGTGCCGCCGAGCGTCAGATCACGGCGCTTGCGTCGGTCGAGACGGTGCTCGACGGACGGGACGAGCTGGTTGGCGTCGCCGTGACCGCCGACGGCGCGCGTTACGTCTCGGACCGCGGTGCCGGAAGCGTCTACCGCGTCTCCGCGGTCGGTGCGCTGAGCATCGCCCTCAAGAGACTGGACCGCCCGGCCGGGCTCGCCCTCGACGCCGAGGGTCGCCTGCTCATCGCCGAAGAGGGAGCGGGCCGCATCCTGCGGCTCGAGCCCTCGGGCGCGCTGACCGTCCTTGTGACGGGCATCAAGAAGCCGCGCTGGATGGCCGCCGCCGACGGCAGCCTGTACATCAGCGCCCATCGCCAGATCCCTCGTGACGACGGCCGTCGCGGCCGCGCCCCTCGCGACGACGCCGACGCGAGCGGCGAGGAGGCGATTCTCCGCCTCGCCCCTGACGGCACGCTCGCCACGGTGGCCGACGGCATGCAGCAGGTGGAGGCGCTCGCCCTCGGCGAGGGCTACCTCGATGCCGCGGCGAAGGGTCTCGGGGGCAAGGCGGACACCACGGGCATCGTCCTGCGCTATCCGGTCCTCGCTGACGGGAGCCTCGGGACCCCCGTCACGCTGGTCCGTGGCGAGCTCACGCAGCCGGTGGGCCTCGCCCCTGATGGACTCGGAGCCGAGTACGTGTCGATGAAGGGCCTGACGCTCGAGCAGGACACCTCGAAGCGCGCCATCGGCAAGATCCACCCCGACGGCCAGCTGACCGACTTCGCCGCCAATCTCATCGACCCGCAAGGGCTCGCCTTCGGCCCCGACGGCGCGCTCTACCTCGCCGACGGGAAAGCCGGGCGGCTCCTGGAGTTCCGCGCGCCGTCGGCGCTCACGCTGAGGGCGCCCGCCTTCACCAACCGGTCACCGGTGACGGTGAGCGGGACCACCACTCCAGGCGCGCGCGTCGACCTCTTTCTGAACGGCGCCACCGCACCGGCCACCGTGACGGCGGATGCGATCGGCGGCTTCACAGCCTCGATCACGCTCACGCCTAACAGCACGAACACCGTCGTCGTCTACGCGACGGCAGGCGCAGGGAACGGGCTCAGCTCGCCGCCCGCCGAGGCGATGATCGTCCACGACGATATCCCGCCCACCCTCGCCTTCCCGACACCGGCCGCCGGCAGCTACGCGCGGCTCGACGTGAGCGTCAAGGCTCAGGCCGGCGACGGCGGCAGCGGCGTGGCGACCCTCGCGCTCAGCGTGGACGGCCGGCCACTCAGCAGCACGGTCGCTCCCCCGCTCCCCACGCCGAGCGCCGCGGCTGGGGCGACGTGGTCGACGACGACCGTACCCGATGGCGCTCATACCCTGGGCGCCGTCACGGTCGACCGGGCGACGAACGCCACGGCGACCACGCGCGTCGTGATCGTGGACAACACGCCTCCCGACACGCAGATCACGAGCGGGCCGAGCGGCGTGATCCAGGTCGCGAGCGCGACGTTCACCTTCACCGGGACCGACTTCCTGACGCCCGTGGCGAGCCTCCGGTTCGCCTGGCGCGTGGACGGTGGGGCCTTCGCGCCGTTCGATCCCCAGCCGACGGCGCCGCTCACCGGCCTGAGCGAGGGGGTTCACACCTTCGAGGTCAAGGCCCTCGACCTGGCGGGCAACGAAGATCCCACACCGGCGGTGCGGACCTTCACGGTCCGATTCCCGCCGAGCATCACCAGGGTCGACCCGGAGCGCGGGCCGGCGGGCACCCTCGTGACGATCACGGGTGAGCGGTTCGATCCCGACACGCAGGTGACGTTCGCCGGCGTCTCCGCGCTCGTGCTGTCGCAGGCACCGACGGGCATCACGACGCGGGTGCCGGTCGGAGCGGTGACGGGCCCGCTCGTGGTGACGAACTCGCGGGGCAGCGCGACGGCCACGTTCACCGTGCCGCCGCCGCCGGTGATCACCTCGTTCGTGCCGACGCGCGGTGGGATGGGGGACACCGTCGTCATCATCGGGACCGGCTTCGACCCGACCCCGGCGAACAACGTCGCGCGGTTCAACGGCACGCCCGCTCTCGTGGTGTCCGCCGAGCCGACACGCTTGACCGTCCAGGTGCCGGCCGGCGCGACGTCGGGGCCGATCGGCGCGACGACGCCGGCCGGCTCAGCGACGAGCGCCCAGAGCTTCACCGTTGTCGGTCGGGTGCCGCGGATCGTGGCGACGGTCGATCCGCCGTTCCTGCAGCCGACGGACATCCAGGTGAGCCGGGACGGGCGACGCGCGTACGTCGTCAATCAGGGCCGCAATAACGTGAGCGTGATCGACAGCGCCAGCCATTCGATCATTGCGACGATGCCGGCCGGCGCCGGAGCGTTTCGGTCCGTCATCACGCCGGACAGCGCTCGGCTCTACGTGCTCAACCGCCTGGCGGTGTCGGTCACGGTATTTGACCTCGCGACGAACGGCGTGGTGACGACGATCCCGCTGGTCGCGACTGACGCAGCGTTGCTTGCGATGAGCCCGGACGGCCGCAGCGTGCTGGTGACCAACCCGACCGACGCCCGCGTGAGCCTCATCGACACCGCCACCAACACCGTGGCGACACGGATTCCGGTCGGGCGCTGGCCGAGCGGCATCGCGGCGTCACCCGACAACCGGCGCGTCTACGTGCACAACGTCCTCGACGACACGATCAGCGTCGTCGACGTGGTCTCGCGCACCGTCGTGGCGACGATCGCGAGCGGACGGTTTACGGGCAGCGCCACCTTCGGTGTCTTCACCCCGGACGGGGCCCGCTACTACACGACGGACGGCGGCAACAACGTCGTGGTCGTCGACACCGCGACGAACGCGGTGACCAACATTGCTGGCCCCTTCAGCAGCCCGGTCGCCGCGGCCGTCCATCCGACGGCCGGGCGGCTCTACGTCGGCGATAGCTTTGTCCGCCCGAGCTTCCAGCCCGCCGTCGTGGTCCTCGATACCCGGACGAACGCGGTGGTCGCGACCCTCAGCGTGGGTGGGGACCCCCGGAGCATCGTCGTGACGCCCGACGGCCAGCGGGTCGTCGTGGCGGCGACTCGGGAGAACACGGCCGCGGTCATCGATCCCGCGACGAACACGGTGGCGAGCGTCGTGCGGCTGAACGCGGCGACGCCGCTGGTCGGCGCCGCCCTCACGGGGGGCCGGCTCGTCTACATCGTGGGCCGCGACAGCAACAGCCTCAGCGTCCTGGATCTTGCCGTGAACGGGATGGTCGACGCGCCCGTCTCGCGCACCGGCGCGCCGCAGGACCTGCTCGTCGCGACGCAAGCGGGTGACAAGGTGTTCGGGAGCGCGGGTTTCACCACCGCGTTCCTCGCCGCGCTGGACACTCGAACGAACACCGCGCTCCCCAACACGACGATTCCCAGGTCCCCAGCGCGCTCGGCCCCGGTGCTGGCGGCGGTGACCGCGGATCCCGTGACCGGCGGGACGGTCTACCTCGACGACAGCCGCTCGCTCATCTATCTCATGGACGTGGCGACGGGCACGCTCACGAGCACCATCGCGAAGTCCACCGCCGGGTCGCCGGCCAGGCTCCTCGTCACGCCGGATGGGTCTCGCCTTTTCTCGATCGATGCGAGCCGCATCGCCGTGATCGACGTCGCCACCCGCACCCAGCTGGGCGTCACGTCCTTCACCGGCGGGGTCGGTGCGGGGATCGCCAACGCGGCCCGGACGACCTTCTATGCGGGTGCCGTCCTGGGTGCCGGCTCGTTTGCGGTCAGGGGTGTCGATCTCAACACGACGACGGTCGTTGCGACGGTGCCAGTCCCGTTCCAACCCTCCCAGCTCGCCCTGACGGGCGACGAGCGCAAGCTCCTGGTCGTCGGCCGGTTCAATACGAGCATCCCGGTGATCGACACCGTGCGGAACACGGTCGTGGCGACCCTCGCGCCGGGCGGCGGGATTTACAACGACCTCGTGACCAGCCCGACGCCGCCGCGGGCCTTCCTGGCGAATGGCGGCGCCAACCGCGTCGATGTCATCGACACGAGCGCCAACGCGGTTGTTGGAAGCGTCGCGCTCCCCGACGCCCCGGTCTTCCTGGCGATCAGTGGCGATGGCGCGAGACTGTACGCCGTCCAGAGCCGCACCGGGGTCATCAGCGTCATCGACACGCAGACCTTGTCGATCCTCGTCAACCTCACGGTCGCCGTGGGGACCAACGGTCTCCAGCGCCCCATCGTGGCGCCCAACGGCCGCCTGTACGTGCCCCACGGGGACTTCGGCTCCCTCACCGTCGTCGAGTGA
PROTEIN sequence
Length: 1447
MRRLVVIGPVVLGLLAFTVEGAAERQITALASVETVLDGRDELVGVAVTADGARYVSDRGAGSVYRVSAVGALSIALKRLDRPAGLALDAEGRLLIAEEGAGRILRLEPSGALTVLVTGIKKPRWMAAADGSLYISAHRQIPRDDGRRGRAPRDDADASGEEAILRLAPDGTLATVADGMQQVEALALGEGYLDAAAKGLGGKADTTGIVLRYPVLADGSLGTPVTLVRGELTQPVGLAPDGLGAEYVSMKGLTLEQDTSKRAIGKIHPDGQLTDFAANLIDPQGLAFGPDGALYLADGKAGRLLEFRAPSALTLRAPAFTNRSPVTVSGTTTPGARVDLFLNGATAPATVTADAIGGFTASITLTPNSTNTVVVYATAGAGNGLSSPPAEAMIVHDDIPPTLAFPTPAAGSYARLDVSVKAQAGDGGSGVATLALSVDGRPLSSTVAPPLPTPSAAAGATWSTTTVPDGAHTLGAVTVDRATNATATTRVVIVDNTPPDTQITSGPSGVIQVASATFTFTGTDFLTPVASLRFAWRVDGGAFAPFDPQPTAPLTGLSEGVHTFEVKALDLAGNEDPTPAVRTFTVRFPPSITRVDPERGPAGTLVTITGERFDPDTQVTFAGVSALVLSQAPTGITTRVPVGAVTGPLVVTNSRGSATATFTVPPPPVITSFVPTRGGMGDTVVIIGTGFDPTPANNVARFNGTPALVVSAEPTRLTVQVPAGATSGPIGATTPAGSATSAQSFTVVGRVPRIVATVDPPFLQPTDIQVSRDGRRAYVVNQGRNNVSVIDSASHSIIATMPAGAGAFRSVITPDSARLYVLNRLAVSVTVFDLATNGVVTTIPLVATDAALLAMSPDGRSVLVTNPTDARVSLIDTATNTVATRIPVGRWPSGIAASPDNRRVYVHNVLDDTISVVDVVSRTVVATIASGRFTGSATFGVFTPDGARYYTTDGGNNVVVVDTATNAVTNIAGPFSSPVAAAVHPTAGRLYVGDSFVRPSFQPAVVVLDTRTNAVVATLSVGGDPRSIVVTPDGQRVVVAATRENTAAVIDPATNTVASVVRLNAATPLVGAALTGGRLVYIVGRDSNSLSVLDLAVNGMVDAPVSRTGAPQDLLVATQAGDKVFGSAGFTTAFLAALDTRTNTALPNTTIPRSPARSAPVLAAVTADPVTGGTVYLDDSRSLIYLMDVATGTLTSTIAKSTAGSPARLLVTPDGSRLFSIDASRIAVIDVATRTQLGVTSFTGGVGAGIANAARTTFYAGAVLGAGSFAVRGVDLNTTTVVATVPVPFQPSQLALTGDERKLLVVGRFNTSIPVIDTVRNTVVATLAPGGGIYNDLVTSPTPPRAFLANGGANRVDVIDTSANAVVGSVALPDAPVFLAISGDGARLYAVQSRTGVISVIDTQTLSILVNLTVAVGTNGLQRPIVAPNGRLYVPHGDFGSLTVVE*