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13_1_20cm_4_scaffold_2966_6

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: 3651..5030

Top 3 Functional Annotations

Value Algorithm Source
sigma-54 dependent DNA-binding response regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 459.0
  • Bit_score: 789
  • Evalue 2.10e-225
Two component, sigma54 specific, transcriptional regulator, Fis family id=1884909 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 460.0
  • Bit_score: 785
  • Evalue 3.70e-224
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 469.0
  • Bit_score: 489
  • Evalue 1.20e-135

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGTCTGATCCCGCGACGCTGCTGATCGCCGACGACGATCCGGGGCTCCGCCAGAGCCTCGAGCGCACGCTGACGCGCGAGGGGTACCGCGTCATCCTCGCCTCCGACGGCAACGCCGCCCTCGAGCGCCTCCAGGCGGGGGGCGTGGACCTGGTCCTCACCGACCTCAAGATGCCAGGGCTCTCGGGTATCGAGCTGCTCCGCGCGGTCAAGGCGATCGCGTCCGAAGTGGACGTGATCCTCCTGACCGCCTTCGGCACGGTCGAGGAGGCGGTCAAGGCGATGAAGGAGGGCGCGTACGACTTCCTCACCAAGCCGTTCCAGCGCGCCCAGCTCCTGCGCTTGATCCGCCAGGCCCTCGAGCGCCGAGACCTGATCCAGCAGAACCGCGCGCTCCAGCAGCGGCTCGACGACCTGCTCCAGCAGGGCGCGGTCATCGGCTCGAGCCCCGCGTTCCGCCGGATGATGACGCTCCTCGAGCAGGTCGCCGGCAGCTCCGCGACGGTGCTCGTCCAGGGCGAGAGCGGCACCGGCAAGGAGCTCGTCGCCCGCACGATCCACGCGCGCTCGGCGCGGAGCCGCGGCCCGTTCGTCGCGGTCAACTGCGCCGCGCTGCCCGAGACGCTGCTCGAGTCGGAGCTGTTCGGCTACGAGAAGGGCGCGTTCACCGGCGCGGCGGGGCGGAAGGAGGGCCGCTTCGAGCTGGCCGACGGGGGCACGCTCTTCCTCGACGAGGTCTCCGACCTCTCGGCGGTGACCCAGCCCAAGATCCTGCGCGTGCTCCAGGAGGGCGAGTTCGAGCGCCTCGGCGGCACGAAGACGCTTCGGGTGGACGTCCGCATCGTCGCGGCGACCAACCAGGGTCTCGCGCAGATGGTGCGGGAGAAGCGGTTCCGCGAGGATTTGTACTACCGGCTCAACGTCATCACGATGACCGTGCCGCCGCTCCGCGAGCGGAGCGAGGACATCCGCGTCCTCGCCCAGCACTTCCTCCGCGTCTACGCGGCGAAGAACAATCGCCGGCTCGAGGGCTTCACCGACGACGCGATCCGTCGGCTCGAGGCGTACGCCTGGCCCGGGAACGTGCGCGAGCTCGAGAATGTCATCGAGCGGGGCGTCGTGCTGACCCCGGGCGCGCTCATGGACATGACCGACCTGCCCCCGGAGATCGCCGGCGCGACGCCGCTCCCCGAGGGCGTGCTCTCGATCCGCATCGGCACGCCGCTCGCCGAGGTCGAGGCGCGGCTGCTCGAGGAGACGCTCCGCGCCACCAAGGGCAACAAGACACTCACCGCCAAGCTGCTCGGTATCGACCCCACCACTGTCTTGCGCAAGCTCAAGCGTCAGGACGAGCAAGGCGAGGGCGACGCCGCCTCGTGA
PROTEIN sequence
Length: 460
MSDPATLLIADDDPGLRQSLERTLTREGYRVILASDGNAALERLQAGGVDLVLTDLKMPGLSGIELLRAVKAIASEVDVILLTAFGTVEEAVKAMKEGAYDFLTKPFQRAQLLRLIRQALERRDLIQQNRALQQRLDDLLQQGAVIGSSPAFRRMMTLLEQVAGSSATVLVQGESGTGKELVARTIHARSARSRGPFVAVNCAALPETLLESELFGYEKGAFTGAAGRKEGRFELADGGTLFLDEVSDLSAVTQPKILRVLQEGEFERLGGTKTLRVDVRIVAATNQGLAQMVREKRFREDLYYRLNVITMTVPPLRERSEDIRVLAQHFLRVYAAKNNRRLEGFTDDAIRRLEAYAWPGNVRELENVIERGVVLTPGALMDMTDLPPEIAGATPLPEGVLSIRIGTPLAEVEARLLEETLRATKGNKTLTAKLLGIDPTTVLRKLKRQDEQGEGDAAS*