ggKbase home page

13_1_20cm_4_scaffold_3140_12

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: 5882..6298

Top 3 Functional Annotations

Value Algorithm Source
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 116.0
  • Bit_score: 178
  • Evalue 5.10e-42
50S ribosomal protein L5 id=4666301 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 116.0
  • Bit_score: 156
  • Evalue 1.50e-35
rplE; 50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 110.0
  • Bit_score: 91
  • Evalue 1.60e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGGCCAAGGACGCGCCGAAGGCAGCACCGAAGCCACAGCCCGGCAAGCCCGCCGCGGCCGCGAAGGCTCAGCCGCGGAAGGGCGAGGGCGCCACGCAAGGCGCGACCGTCGCGAAGGGGCGGCCGAAGGGCGCGGGCGAGGTCCCGCCGCGGCTCAAGGTGGCGTTCCAGCAGACGATGCTCCCGGCGCTCATGAAGGAGCGCGGGTACACGAACCCGTGGCAAGTGCCGCGCGTCGAGAAGGTCGTGATCAACATGGGCGTCGGCGAGGGGCGGGAGAACGCCAAGGTGCTCGACTTCGCGACGGCCGATCTCCAGTCGATCACGGGACAGAGCGCGTCCGCGACTTCAAGGGCGTGCCATCGAAGGGGTTCGACGGGCGTGGCAACTACGCGCTCGGGCTCCGCGAGCAGGTGA
PROTEIN sequence
Length: 139
MAKDAPKAAPKPQPGKPAAAAKAQPRKGEGATQGATVAKGRPKGAGEVPPRLKVAFQQTMLPALMKERGYTNPWQVPRVEKVVINMGVGEGRENAKVLDFATADLQSITGQSASATSRACHRRGSTGVATTRSGSASR*