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13_1_20cm_4_scaffold_1307

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1307_1
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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2..793
DNA (792bp) protein (264aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BES1_STRRD
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:ACZ84434.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangi
pyridoxal-dependent decarboxylase
13_1_20cm_4_scaffold_1307_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(800..1684)
DNA (885bp) protein (295aa)
succinate dehydrogenase, subunit C; K03389 heterodisulfide reductase subunit B [EC:1.8.98.1] Tax=RBG_16_Actinobacteria_68_12_curated
Succinate dehydrogenase, subunit C n=1 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DXK8_SULAA
succinate dehydrogenase, subunit C
13_1_20cm_4_scaffold_1307_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1681..2754)
DNA (1074bp) protein (358aa)
sdhB; succinate dehydrogenase/fumarate reductase Fe-s protein subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] Tax=RBG_16_Actinobacteria_68_12_curated
sdhB; succinate dehydrogenase/fumarate reductase Fe-s protein subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] id=15193802 bin=GWC2_NOV_55_46 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
succinate dehydrogenase subunit B (EC:1.3.5.1)
13_1_20cm_4_scaffold_1307_4
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2754..4436)
DNA (1683bp) protein (561aa)
sdhA; succinate dehydrogenase/fumarate reductase flavoprotein subunit (EC:1.3.99.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=GWC2_Deltaproteobacteria_42_11_curated
sdhA; succinate dehydrogenase/fumarate reductase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA31_9BACT
13_1_20cm_4_scaffold_1307_5
unknown

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comp(4494..4643)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_4_scaffold_1307_6
unknown

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comp(4624..4776)
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_20cm_4_scaffold_1307_7
Thermus sp. 2.9, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(4842..6440)
DNA (1599bp) protein (533aa)
pckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PJG3_THESS
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
13_1_20cm_4_scaffold_1307_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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6547..7107
DNA (561bp) protein (187aa)
GCN5-related N-acetyltransferase n=1 Tax=Patulibacter medicamentivorans RepID=H0E4J2_9ACTN
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EHN11398.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patuli
acetyltransferase
13_1_20cm_4_scaffold_1307_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7142..7969
DNA (828bp) protein (276aa)
Tyrosine recombinase XerC n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1B9_CONWI
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
integrase
13_1_20cm_4_scaffold_1307_10
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8199..8918
DNA (720bp) protein (240aa)
Tyrosine recombinase XerD n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKQ0_THEM7
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source
tyrosine recombinase XerD
Displaying 10 items

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