ggKbase home page

13_1_20cm_4_scaffold_1845

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1845_1

Not on your lists

2..232
DNA (231bp) protein (77aa)
Putative AhpC/TSA family protein {ECO:0000313|EMBL:ABZ10146.1}; TaxID=455559 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10H11.;"
13_1_20cm_4_scaffold_1845_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(234..1010)
DNA (777bp) protein (259aa)
enoyl-ACP reductase (EC:1.3.1.9); K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=RBG_16_Actinobacteria_68_12_curated
enoyl-ACP reductase (EC:1.3.1.10)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQS0_9BACT
13_1_20cm_4_scaffold_1845_3
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1050..4424
DNA (3375bp) protein (1125aa)
Minor extracellular protease vpr {ECO:0000313|EMBL:EGK11418.1}; EC=3.4.21.- {ECO:0000313|EMBL:EGK11418.1};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Des
Minor extracellular protease vpr n=1 Tax=Desmospora sp. 8437 RepID=F5SFT5_9BACL
subtilase family serine protease
13_1_20cm_4_scaffold_1845_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

4545..5294
DNA (750bp) protein (250aa)
Oxidoreductase n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VVI0_PAETH
short-chain dehydrogenase/reductase SDR Tax=RBG_16_Actinobacteria_67_10_curated
oxidoreductase
13_1_20cm_4_scaffold_1845_5
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5308..5709
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D96D5
MarR family transcriptional regulator {ECO:0000313|EMBL:AKC69723.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandora
MarR family transcriptional regulator
13_1_20cm_4_scaffold_1845_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6066..6767)
DNA (702bp) protein (234aa)
Methyltransferase type 11 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C573_SPHTD
UbiE/COQ5 family methyltransferase Tax=RBG_16_Actinobacteria_68_12_curated
methyltransferase type 11
13_1_20cm_4_scaffold_1845_7
Synechococcus sp. RS9917, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6721..7446)
DNA (726bp) protein (242aa)
Poly A polymerase family protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z332_9SYNE
Poly A polymerase family protein {ECO:0000313|EMBL:EAQ70588.1}; TaxID=221360 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. RS9917.;
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase
13_1_20cm_4_scaffold_1845_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7716..8627)
DNA (912bp) protein (304aa)
alanine racemase; K01775 alanine racemase [EC:5.1.1.1] Tax=RBG_16_Actinobacteria_67_10_curated
Alanine racemase n=3 Tax=Streptomyces clavuligerus RepID=B5GNU0_STRC2
alr; alanine racemase
13_1_20cm_4_scaffold_1845_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8668..9990)
DNA (1323bp) protein (441aa)
carbohydrate kinase n=1 Tax=Patulibacter americanus RepID=UPI0003B37D8C
Uncharacterized protein {ECO:0000313|EMBL:EHN12821.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
YjeF family C-terminal domain
13_1_20cm_4_scaffold_1845_10
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10197..11123)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNT302 RepID=UPI00035FE36F
Hydrolase {ECO:0000313|EMBL:CCK25935.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
hydrolase
13_1_20cm_4_scaffold_1845_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11208..11621
DNA (414bp) protein (138aa)
Class I peptide chain release factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4Z8_CONWI
Class I peptide chain release factor {ECO:0000313|EMBL:ADB48576.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Con
class I peptide chain release factor
13_1_20cm_4_scaffold_1845_12
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11618..12898)
DNA (1281bp) protein (427aa)
membrane protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B5ABB2 rbh
Membrane protein {ECO:0000313|EMBL:KHL02945.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
integral membrane protein
13_1_20cm_4_scaffold_1845_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12920..14746)
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8I1_CONWI
glucosamine/fructose-6-phosphate aminotransferase
13_1_20cm_4_scaffold_1845_14
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(14867..16126)
DNA (1260bp) protein (420aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F329_CONWI
Tax=BJP_IG2102_Coriobacteriales_64_17
13_1_20cm_4_scaffold_1845_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16134..16538)
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=2 Tax=Sulfobacillus acidophilus RepID=F8I5T0_SULAT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Se
rpsI; 30S ribosomal protein S9
13_1_20cm_4_scaffold_1845_16
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(16539..16982)
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F327_CONWI
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RBG_16_Actinobacteria_64_13_curated
50S ribosomal protein L13
13_1_20cm_4_scaffold_1845_17
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17529..18089
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B33E00
Uncharacterized protein {ECO:0000313|EMBL:AHH96284.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein
Displaying 17 items

View Taxonomy