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13_1_20cm_4_scaffold_3569

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3569_1
unknown

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1..96
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_20cm_4_scaffold_3569_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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93..398
DNA (306bp) protein (102aa)
Stress-like protein {ECO:0000313|EMBL:ETK35500.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
13_1_20cm_4_scaffold_3569_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

395..778
DNA (384bp) protein (128aa)
NusB antitermination factor; K03625 N utilization substance protein B Tax=RBG_16_Actinobacteria_67_10_curated
N utilization substance protein B homolog id=3787638 bin=GWC2_Deltaproteobacteria_55_46 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
NusB antitermination factor
13_1_20cm_4_scaffold_3569_4
unknown

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885..1064
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_4_scaffold_3569_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1061..1327
DNA (267bp) protein (89aa)
polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_16_Actinobacteria_67_10_curated
farnesyl-diphosphate synthase (EC:2.5.1.10)
polyprenyl synthetase n=1 Tax=Patulibacter americanus RepID=UPI0003B61380
13_1_20cm_4_scaffold_3569_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1324..1680
DNA (357bp) protein (119aa)
polyprenyl synthetase; K13789 geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_16_Actinobacteria_67_10_curated
crtE; Farnesyltranstransferase (EC:2.5.1.29)
Polyprenyl synthetase n=1 Tax=Veillonella sp. CAG:933 RepID=R5BGC0_9FIRM
13_1_20cm_4_scaffold_3569_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2166..3185
DNA (1020bp) protein (340aa)
Hemolysin A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCY7_CONWI
Hemolysin A {ECO:0000313|EMBL:ADB51499.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain
hemolysin A
13_1_20cm_4_scaffold_3569_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3172..3966
DNA (795bp) protein (265aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCY8_CONWI
ATP-NAD/AcoX kinase
13_1_20cm_4_scaffold_3569_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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4005..5660
DNA (1656bp) protein (552aa)
DNA repair protein RecN n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCY9_CONWI
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RBG_16_Actinobacteria_67_10_curated
DNA repair protein RecN
13_1_20cm_4_scaffold_3569_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5693..6838
DNA (1146bp) protein (382aa)
Thiamin pyrophosphokinase catalytic region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCZ0_CONWI
Thiamin pyrophosphokinase catalytic region {ECO:0000313|EMBL:ADB51502.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
Thiamin pyrophosphokinase catalytic region
13_1_20cm_4_scaffold_3569_11
unknown

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6849..7277
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_20cm_4_scaffold_3569_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7454..7984
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCZ1_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB51503.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sourc
hypothetical protein
13_1_20cm_4_scaffold_3569_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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7944..9188
DNA (1245bp) protein (415aa)
Glycosyl transferase family 2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F029_CONWI
cell wall biogenesis glycosyltransferase Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
family 2 glycosyl transferase
13_1_20cm_4_scaffold_3569_14
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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9408..10703
DNA (1296bp) protein (432aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RBG_16_Actinobacteria_64_13_curated
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCZ3_CONWI
13_1_20cm_4_scaffold_3569_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10838..11962
DNA (1125bp) protein (375aa)
Peptidase dimerization domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCZ4_CONWI
peptidase dimerization domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
peptidase dimerization domain-containing protein
13_1_20cm_4_scaffold_3569_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11952..12935
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCZ5_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB51507.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_4_scaffold_3569_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13102..13350
DNA (249bp) protein (83aa)
NTP pyrophosphohydrolase {ECO:0000313|EMBL:CDM66458.1}; EC=3.6.1.13 {ECO:0000313|EMBL:CDM66458.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="P
NUDIX hydrolase n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RIC6_MOOTA
NUDIX hydrolase
13_1_20cm_4_scaffold_3569_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13362..14330
DNA (969bp) protein (323aa)
ald3; Alanine dehydrogenase (EC:1.4.1.1) Tax=RBG_16_Actinobacteria_68_12_curated
ald1; Alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YX84_9PSEU
13_1_20cm_4_scaffold_3569_19
unknown

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comp(14503..14634)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_20cm_4_scaffold_3569_20
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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14670..15821
DNA (1152bp) protein (384aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|H
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DLC8_9FIRM
13_1_20cm_4_scaffold_3569_21
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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15818..16540
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036EED79
Methyltransferase type 11 {ECO:0000313|EMBL:EON25107.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
transcriptional regulator
13_1_20cm_4_scaffold_3569_22
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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16537..17838
DNA (1302bp) protein (434aa)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EE13_THECK
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:AGA58057.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti
pyrimidine-nucleoside phosphorylase
13_1_20cm_4_scaffold_3569_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17912..18733
DNA (822bp) protein (274aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020854}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD01_CONWI
13_1_20cm_4_scaffold_3569_24
Alcanivorax sp. P2S70, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18747..19001)
DNA (255bp) protein (85aa)
glutaredoxin n=1 Tax=Psychromonas hadalis RepID=UPI0003B61A69
Glutaredoxin {ECO:0000313|EMBL:ERP89862.1}; TaxID=1397527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. P2S70.;"
grxC; glutaredoxin 3
13_1_20cm_4_scaffold_3569_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19071..19823
DNA (753bp) protein (251aa)
DNA repair protein RecO n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD10_CONWI
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=469383 species="Bacteria; Actinobacteria; The
DNA repair protein RecO
13_1_20cm_4_scaffold_3569_26
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20008..20757
DNA (750bp) protein (250aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA syntheta
glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit n=1 Tax=Geobacter sp. (strain M18) RepID=E8WQ31_GEOS8
13_1_20cm_4_scaffold_3569_27
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20738..22435
DNA (1698bp) protein (566aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
glyS; glycyl-tRNA synthetase subunit beta GlyS (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LFT2_THEPS
13_1_20cm_4_scaffold_3569_28
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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22447..23283
DNA (837bp) protein (279aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NJ80_KYTSD
hypothetical protein
13_1_20cm_4_scaffold_3569_29
unknown

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23280..23474
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying 29 items

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