ggKbase home page

13_1_20cm_4_scaffold_4489

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4489_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1..750
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0C5_CONWI
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_4489_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

750..1355
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037CF7BA
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_20cm_4_scaffold_4489_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1496..2554
DNA (1059bp) protein (353aa)
Acyl-CoA dehydrogenase n=1 Tax=mine drainage metagenome RepID=E6Q1T9_9ZZZZ
acyl-CoA dehydrogenase domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_4489_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2659..3417
DNA (759bp) protein (253aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=K1E1R9_PSEAI
Methyltransferase {ECO:0000313|EMBL:CKG78812.1}; SAM-dependent methyltransferase {ECO:0000313|EMBL:AKE67244.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseud
hypothetical protein
13_1_20cm_4_scaffold_4489_5
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3601..3816
DNA (216bp) protein (72aa)
DNA polymerase LigD, polymerase domain-containing protein n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EXG4_STRRM
DNA polymerase LigD, polymerase domain-containing protein {ECO:0000313|EMBL:ELQ83930.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="S
DNA polymerase LigD, polymerase domain-containing protein
13_1_20cm_4_scaffold_4489_6
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3813..4397
DNA (585bp) protein (195aa)
hypothetical protein; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RBG_16_Actinobacteria_68_21_curated
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WD4_SOLUE
hypothetical protein
13_1_20cm_4_scaffold_4489_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4394..5314)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036B9660
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_4489_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

5384..6814
DNA (1431bp) protein (477aa)
Protein p49 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ELQ6_9CHLR
Protein p49 {ECO:0000313|EMBL:CCF85618.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolance
FAD dependent oxidoreductase
13_1_20cm_4_scaffold_4489_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6824..7468
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDW5_CATAD
Uncharacterized protein {ECO:0000313|EMBL:ACU76553.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora ac
hypothetical protein
13_1_20cm_4_scaffold_4489_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(7465..8379)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDZ1_CONWI
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein
13_1_20cm_4_scaffold_4489_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8396..8965)
DNA (570bp) protein (190aa)
HhH-GPD family protein Tax=RBG_16_Actinobacteria_68_12_curated
HhH-GPD family protein id=14629871 bin=bin8_Chloro species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
HhH-GPD family protein
13_1_20cm_4_scaffold_4489_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9033..10178)
DNA (1146bp) protein (382aa)
Choline dehydrogenase {ECO:0000313|EMBL:EHN11930.1}; EC=1.1.99.1 {ECO:0000313|EMBL:EHN11930.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteracea
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003661AF7
glucose-methanol-choline oxidoreductase
13_1_20cm_4_scaffold_4489_13
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10188..10703)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI00036F4CA5
Uncharacterized protein {ECO:0000313|EMBL:EFV91331.1}; TaxID=910954 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
hypothetical protein
13_1_20cm_4_scaffold_4489_14
unknown

Not on your lists

10746..10958
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_4_scaffold_4489_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10979..15103
DNA (4125bp) protein (1375aa)
DEAD/H associated domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2R2_CONWI
DEAD/H associated domain protein {ECO:0000313|EMBL:ADB54193.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexib
DEAD/DEAH box helicase
13_1_20cm_4_scaffold_4489_16
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15100..15777
DNA (678bp) protein (226aa)
kinase n=1 Tax=Streptomyces sp. CNB091 RepID=UPI000370BBF6
Uncharacterized protein {ECO:0000313|EMBL:BAG23782.1}; TaxID=455632 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus subsp. griseus
hypothetical protein
13_1_20cm_4_scaffold_4489_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15782..16852
DNA (1071bp) protein (357aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:EHN10394.1}; EC=3.2.2.23 {ECO:0000313|EMBL:EHN10394.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Pa
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Patulibacter medicamentivorans RepID=H0E7H4_9ACTN
13_1_20cm_4_scaffold_4489_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16957..17412
DNA (456bp) protein (152aa)
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 18 items

View Taxonomy