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13_1_20cm_4_scaffold_4702

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4702_1
Selenomonas sp. CM52, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2..439
DNA (438bp) protein (146aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=936381 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Selenomonas sp. CM52 RepID=J5VHY5_9FIRM
sun protein
13_1_20cm_4_scaffold_4702_2
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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436..1311
DNA (876bp) protein (292aa)
Aminoglycoside/hydroxyurea antibiotic resistance kinase {ECO:0000313|EMBL:CCH21079.1}; EC=2.7.1.72 {ECO:0000313|EMBL:CCH21079.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; M
Aminoglycoside/hydroxyurea antibiotic resistance kinase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LB82_9ACTO
aminoglycoside/hydroxyurea antibiotic resistance kinase
13_1_20cm_4_scaffold_4702_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1323..1697
DNA (375bp) protein (125aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RBG_16_Actinobacteria_68_12_curated
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H4_CONWI
13_1_20cm_4_scaffold_4702_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1702..1851
DNA (150bp) protein (50aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_4702_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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1848..2864
DNA (1017bp) protein (339aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] T
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q4P8_KRIFD
13_1_20cm_4_scaffold_4702_6
unknown

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2809..3030
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_4_scaffold_4702_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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3226..3780
DNA (555bp) protein (185aa)
riboflavin synthase alpha chain (EC:2.5.1.9) Tax=RBG_16_Actinobacteria_67_10_curated
riboflavin synthase, subunit alpha (EC:2.5.1.9)
Riboflavin synthase n=1 Tax=Clostridium ultunense Esp RepID=M1Z8L2_9CLOT
13_1_20cm_4_scaffold_4702_8
R_Gammaproteobacteria_45_12, Gammaproteobacteria, Proteobacteria, Bacteria

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3777..4181
DNA (405bp) protein (135aa)
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_45_12_curated
13_1_20cm_4_scaffold_4702_9
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4202..5314
DNA (1113bp) protein (371aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Geobacter sp. (strain M21) RepID=C6E3M4_GEOSM
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=443144 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobact
GTP cyclohydrolase II
13_1_20cm_4_scaffold_4702_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5311..6036
DNA (726bp) protein (242aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RBG_16_Actinobacteria_67_10_curated
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Thioalkalivibrio sp. ALSr1 RepID=UPI000366F9D0
ribH; 6,7-dimethyl-8-ribityllumazine synthase
13_1_20cm_4_scaffold_4702_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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6233..6361
DNA (129bp) protein (43aa)
50S ribosomal protein L28 n=1 Tax=Patulibacter americanus RepID=UPI0003B463E6
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_4702_12
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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6397..6759
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Thermoanaerobacterium thermosaccharolyticum RepID=D9TNP8_THETC
hypothetical protein Tax=RBG_16_Acidobacteria_64_8_curated
hypothetical protein
13_1_20cm_4_scaffold_4702_13
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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6914..8494
DNA (1581bp) protein (527aa)
Dak phosphatase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW96_RUBXD rbh
DAK2 domain fusion protein YloV Tax=RBG_16_Actinobacteria_64_13_curated
Dak phosphatase
13_1_20cm_4_scaffold_4702_14
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8524..8910
DNA (387bp) protein (129aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QAC8_STANL
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:BAJ73175.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae;
LuxR family two component transcriptional regulator
13_1_20cm_4_scaffold_4702_15
GWC2_SYX_53_9_curated, Bacteria

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8914..9771
DNA (858bp) protein (286aa)
EDD domain protein, DegV family n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZRP1_THETH
degV family protein Tax=GWC2_SYX_53_9_curated
EDD domain-containing protein, DegV family
13_1_20cm_4_scaffold_4702_16
GWA1_OD1_59_11, Parcubacteria, Bacteria

Not on your lists

9764..10150
DNA (387bp) protein (129aa)
recG; putative ATP-dependent DNA helicase RecG (EC:3.6.4.12)
ATP-dependent DNA helicase RecG n=1 Tax=Dialister sp. CAG:486 RepID=R6AVE1_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KKW48447.1}; TaxID=1618804 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_59_11.;"
Displaying 16 items

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