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13_1_20cm_4_scaffold_5454

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5454_1
unknown

Not on your lists

comp(3..146)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_20cm_4_scaffold_5454_2
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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326..1120
DNA (795bp) protein (265aa)
Serine/threonine protein kinase n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2ZAP0_9NOCA
Serine/threonine protein kinase with PASTA sensor(S) {ECO:0000313|EMBL:ACU53058.1}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.
serine/threonine protein kinase with PASTA sensor(s)
13_1_20cm_4_scaffold_5454_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1142..1489)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI0003068957
MarR family transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
MarR family transcriptional regulator
13_1_20cm_4_scaffold_5454_4
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1503..1979)
DNA (477bp) protein (159aa)
Transcriptional regulator, MarR family protein {ECO:0000313|EMBL:KFE69044.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hya
MarR family transcriptional regulator id=12554322 bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
MarR family transcriptional regulator
13_1_20cm_4_scaffold_5454_5
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2046..3041
DNA (996bp) protein (332aa)
Multidrug ABC transporter ATP-binding protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A4W0_9ACTN
DrrA: daunorubicin resistance ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AHY47397.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubro
drrA: daunorubicin resistance ABC transporter, ATP-binding protein
13_1_20cm_4_scaffold_5454_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3038..3814
DNA (777bp) protein (259aa)
Putative multidrug ABC transporter permease protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3S0_9ACTN
putative multidrug ABC transporter permease protein Tax=RBG_16_Actinobacteria_68_12_curated
ABC-2 type transporter
13_1_20cm_4_scaffold_5454_7
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3811..4578
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B5DB69
ABC-type multidrug transport system permease component {ECO:0000313|EMBL:AHY47395.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae;
ABC-type multidrug transport system permease component
13_1_20cm_4_scaffold_5454_8
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4686..5012)
DNA (327bp) protein (109aa)
LigC protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FTN4_STIAD
LigC protein {ECO:0000313|EMBL:ADO69648.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella au
LigC protein
13_1_20cm_4_scaffold_5454_9
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5656..7179)
DNA (1524bp) protein (508aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B36A56
Uncharacterized protein {ECO:0000313|EMBL:KGN39766.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
Major facilitator superfamily MFS_1
13_1_20cm_4_scaffold_5454_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7222..8442)
DNA (1221bp) protein (407aa)
argininosuccinate lyase (EC:4.3.2.1); K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037F94B2
argH; argininosuccinate lyase
13_1_20cm_4_scaffold_5454_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8439..9500)
DNA (1062bp) protein (354aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RBG_16_Actinobacteria_68_12_curated
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WHM9_9SYNE
13_1_20cm_4_scaffold_5454_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9497..9961)
DNA (465bp) protein (155aa)
Arginine repressor n=2 Tax=Bacteria RepID=E0XSC8_9ACTN
arginine repressor; K03402 transcriptional regulator of arginine metabolism Tax=RBG_16_Actinobacteria_68_12_curated
arginine repressor, ArgR
13_1_20cm_4_scaffold_5454_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9958..11094)
DNA (1137bp) protein (379aa)
argD; acetylornithine aminotransferase (EC:2.6.1.11); K00818 acetylornithine aminotransferase [EC:2.6.1.11] Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00035C3730
N-acetylornithine aminotransferase
13_1_20cm_4_scaffold_5454_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11091..11759)
DNA (669bp) protein (223aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RBG_16_Actinobacteria_67_10_curated
Acetylglutamate kinase n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I7V0_9CLOT
acetylglutamate kinase
13_1_20cm_4_scaffold_5454_15
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11756..12919)
DNA (1164bp) protein (388aa)
argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase (EC:2.3.1.1 2.3.1.35); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RBG_16_
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D505_PELTS
ArgJ; N-acetylglutamate synthase
13_1_20cm_4_scaffold_5454_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12916..13893)
DNA (978bp) protein (326aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=RBG_16_Actinobacteria_67_10_curated
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Salinispora RepID=UPI00036C4925
13_1_20cm_4_scaffold_5454_17
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13920..14972
DNA (1053bp) protein (351aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
Carbamoyl-phosphate synthase small chain n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E6V6_9FIRM
carbamoyl-phosphate synthase small subunit
13_1_20cm_4_scaffold_5454_18
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14939..15244
DNA (306bp) protein (102aa)
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RBG_16_Betaproteobacteria_66_20_curated
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
carbamoyl phosphate synthase large subunit n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI0003697450
Displaying 18 items

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