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13_1_20cm_4_scaffold_592

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_592_1
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(3..1349)
DNA (1347bp) protein (449aa)
Glycosyl hydrolase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFE9_9BACT
Glycosyl hydrolase {ECO:0000313|EMBL:BAL54885.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
glycosyl hydrolase family protein
13_1_20cm_4_scaffold_592_2
Gracilimonas tropica, Gracilimonas, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1414..2136)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036CC1CF
13_1_20cm_4_scaffold_592_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2238..3134
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HFZ1_METFS
Uncharacterized protein {ECO:0000313|EMBL:AHG93147.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
protein of unknown function DUF4349
13_1_20cm_4_scaffold_592_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3236..5293
DNA (2058bp) protein (686aa)
Glucose dehydrogenase, Gcd and cytochrome c-like domain n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IZ88_DEIGD
Pyrrolo-quinoline quinone repeat-containing protein {ECO:0000313|EMBL:AHG90260.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Pyrrolo-quinoline quinone repeat-containing protein
13_1_20cm_4_scaffold_592_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(5318..6454)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH40_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH90782.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
hypothetical protein
13_1_20cm_4_scaffold_592_6

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comp(6495..9821)
DNA (3327bp) protein (1109aa)
Glycosyl hydrolase BNR repeat-containing protein n=2 Tax=mine drainage metagenome RepID=T1C3I3_9ZZZZ rbh
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:EQD75448.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
BNR/Asp-box repeat-containing protein
13_1_20cm_4_scaffold_592_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9941..11299
DNA (1359bp) protein (453aa)
putative S1B family peptidase (EC:3.4.21.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative S1B family peptidase (EC:3.4.21.-)
Putative S1B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U7_GEMAT
13_1_20cm_4_scaffold_592_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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11366..11779
DNA (414bp) protein (138aa)
acT domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acT domain-containing protein id=14429420 bin=bin3_NC10 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin3_NC10 organism_group=NC10
acT domain-containing protein
13_1_20cm_4_scaffold_592_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(11682..12950)
DNA (1269bp) protein (423aa)
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Y5_GEMAT
13_1_20cm_4_scaffold_592_10
unknown

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comp(12956..13327)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_4_scaffold_592_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13324..13458)
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
13_1_20cm_4_scaffold_592_12
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(13493..13906)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=2 Tax=Chloroflexus RepID=A9WJV9_CHLAA
Uncharacterized protein {ECO:0000313|EMBL:ABY36575.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus
hypothetical protein
13_1_20cm_4_scaffold_592_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13998..14657)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H8Z5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig162, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51939.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
13_1_20cm_4_scaffold_592_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14641..16119)
DNA (1479bp) protein (493aa)
DNA ligase D n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V2_ANADF
DNA ligase D {ECO:0000313|EMBL:ABS25148.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anae
DNA ligase D
13_1_20cm_4_scaffold_592_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17045..17710
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003619ACB
Ku family containing protein; K10979 DNA end-binding protein Ku Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein
Displaying 15 items

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