ggKbase home page

13_1_20cm_4_scaffold_6789

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_6789_1
unknown

Not on your lists

301..1332
DNA (1032bp) protein (344aa)

This feature has no annotations

13_1_20cm_4_scaffold_6789_2
unknown

Not on your lists

1487..2176
DNA (690bp) protein (230aa)

This feature has no annotations

13_1_20cm_4_scaffold_6789_3
unknown

Not on your lists

comp(2091..2699)
DNA (609bp) protein (203aa)

This feature has no annotations

13_1_20cm_4_scaffold_6789_4
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2966..3868
DNA (903bp) protein (301aa)
Probable DNA repair protein BLASA_1744 n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RNB5_BLASD
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=457428 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces livid
putative DNA end-binding protein Ku
13_1_20cm_4_scaffold_6789_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4083..4655
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Rhodococcus sp. R1101 RepID=UPI0002FA57F2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_20cm_4_scaffold_6789_6
unknown

Not on your lists

comp(4662..4817)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_20cm_4_scaffold_6789_trna_1
unknown

Not on your lists

5022..5105
DNA (84bp)
transferRNA
13_1_20cm_4_scaffold_6789_7
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5217..5996
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00037DCD27
Putative serine/threonine-protein kinase pknK {ECO:0000313|EMBL:AHK31534.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus
putative serine/threonine-protein kinase pknK
13_1_20cm_4_scaffold_6789_8
Geobacillus sp. GHH01, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5962..6570)
DNA (609bp) protein (203aa)
phosphoglycerate mutase n=1 Tax=Thermus igniterrae RepID=UPI00037E8164
Phosphoglycerate mutase {ECO:0000313|EMBL:AGE21991.1}; TaxID=1233873 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. GHH01.;"
phosphoglycerate mutase
13_1_20cm_4_scaffold_6789_9
unknown

Not on your lists

comp(6580..6837)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_4_scaffold_6789_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6981..7838
DNA (858bp) protein (286aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Patulibacter medicamentivorans RepID=H0E8I8_9ACTN
trigger factor
13_1_20cm_4_scaffold_6789_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7835..8002
DNA (168bp) protein (56aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9K5_CONWI
Displaying 12 items

View Taxonomy