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13_1_20cm_4_scaffold_98

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_98_1
unknown

Not on your lists

comp(141..905)
DNA (765bp) protein (255aa)

This feature has no annotations

13_1_20cm_4_scaffold_98_trna_1
unknown

Not on your lists

152..226
DNA (75bp)
transferRNA
13_1_20cm_4_scaffold_98_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1048..1350)
DNA (303bp) protein (101aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_98_3
R_NC10_66_22, NC10, Bacteria

Not on your lists


comp(1350..3011)
DNA (1662bp) protein (554aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) id=14625411 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
prolyl-tRNA synthetase (EC:6.1.1.15)
13_1_20cm_4_scaffold_98_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3027..4160)
DNA (1134bp) protein (378aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Actinobacteria_68_12_curated
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Patulibacter medicamentivorans RepID=H0EBE6_9ACTN
13_1_20cm_4_scaffold_98_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4170..5402)
DNA (1233bp) protein (411aa)
zinc-dependent protease, membrane associated (); K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RBG_16_Actinobacteria_68_12_curated
Membrane-associated zinc metalloprotease n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WPI5_KYRT2
membrane-associated zinc metalloprotease
13_1_20cm_4_scaffold_98_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5506..6567)
DNA (1062bp) protein (354aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00037D69B7
1-deoxy-D-xylulose 5-phosphate reductoisomerase
13_1_20cm_4_scaffold_98_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6684..7481)
DNA (798bp) protein (266aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=RBG_16_Actinobacteria_68_12_curated
Phosphatidate cytidylyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F070_CONWI
phosphatidate cytidylyltransferase
13_1_20cm_4_scaffold_98_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7589..8323)
DNA (735bp) protein (245aa)
uppS; undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=RBG_16_Actinobacteria_68_12_curated
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW64_RUBXD
13_1_20cm_4_scaffold_98_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8331..8891)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F072_CONWI
ribosome recycling factor; K02838 ribosome recycling factor Tax=RBG_16_Actinobacteria_68_12_curated
ribosome recycling factor
13_1_20cm_4_scaffold_98_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8888..9673)
DNA (786bp) protein (262aa)
uridylate kinase (EC:2.7.4.22); K09903 uridylate kinase [EC:2.7.4.22] Tax=RBG_16_Actinobacteria_68_12_curated
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Patulibacter medicamentivorans RepID=H0E781_9ACTN
13_1_20cm_4_scaffold_98_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9673..10476)
DNA (804bp) protein (268aa)
Elongation factor Ts n=1 Tax=uncultured gamma proteobacterium RepID=H5SMG1_9GAMM
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RBG_16_Actinobacteria_68_12_curated
translation elongation factor Ts
13_1_20cm_4_scaffold_98_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(10473..11351)
DNA (879bp) protein (293aa)
30S ribosomal protein S2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F075_CONWI
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=RBG_16_Actinobacteria_68_12_curated
30S ribosomal protein S2
13_1_20cm_4_scaffold_98_13

Not on your lists

11668..12618
DNA (951bp) protein (317aa)
Diguanylate cyclase n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7DAG4_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KKM22626.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_4_scaffold_98_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12588..13418)
DNA (831bp) protein (277aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RBG_16_Actinobacteria_68_12_curated
Pseudouridine synthase n=1 Tax=Patulibacter medicamentivorans RepID=H0E784_9ACTN
pseudouridine synthase
13_1_20cm_4_scaffold_98_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13487..14101)
DNA (615bp) protein (205aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036FAE4D
signal peptidase II
13_1_20cm_4_scaffold_98_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14135..14509)
DNA (375bp) protein (125aa)
Sporulation protein, yteA family n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R769_9THEO
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein Tax=RBG_16_Actinobacteria_68_12_curated
transcriptional regulator, TraR/DksA family
13_1_20cm_4_scaffold_98_17
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14518..14697)
DNA (180bp) protein (60aa)
UPF0235 protein WQQ_16460 n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZHY2_9GAMM
UPF0235 protein WQQ_16460 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydroc
hypothetical protein
13_1_20cm_4_scaffold_98_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14816..15250)
DNA (435bp) protein (145aa)
DivIVA domain protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F8P5_DESDL
DivIVA domain; K04074 cell division initiation protein Tax=RBG_16_Actinobacteria_68_12_curated
DivIVA domain-containing protein
13_1_20cm_4_scaffold_98_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15274..15582)
DNA (309bp) protein (103aa)
cell division protein ZapA n=1 Tax=Patulibacter americanus RepID=UPI0003B69585
hypothetical protein; K02221 YggT family protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_98_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15621..16181)
DNA (561bp) protein (187aa)
Cell division protein SepF n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F080_CONWI
hypothetical protein; K09772 cell division inhibitor SepF Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_98_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16195..16815)
DNA (621bp) protein (207aa)
Alanine racemase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F081_CONWI
alanine racemase; K06997 Tax=RBG_16_Actinobacteria_68_12_curated
alanine racemase
13_1_20cm_4_scaffold_98_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16849..17562)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F082_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB51942.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_4_scaffold_98_23
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17559..20120)
DNA (2562bp) protein (854aa)
Polynucleotide adenylyltransferase region; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=RBG_16_Actinobacteria_64_13_curated
Polynucleotide adenylyltransferase region n=1 Tax=Thermincola potens (strain JR) RepID=D5X7B9_THEPJ rbh
Polynucleotide adenylyltransferase region
13_1_20cm_4_scaffold_98_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(20135..20524)
DNA (390bp) protein (130aa)
dfrA Tax=GWC2_Rokubacteria_70_16_curated
Endoribonuclease L-PSP id=4599718 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
endoribonuclease L-PSP
13_1_20cm_4_scaffold_98_25
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20517..21065)
DNA (549bp) protein (183aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Acetonema longum DSM 6540 RepID=F7NEP0_9FIRM
13_1_20cm_4_scaffold_98_26
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21144..22976
DNA (1833bp) protein (611aa)
Serine proteases, subtilase family n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82UC0_NITEU
Serine proteases, subtilase family {ECO:0000313|EMBL:CAD85485.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitro
serine protease
13_1_20cm_4_scaffold_98_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22973..23272)
DNA (300bp) protein (100aa)
UDP-N-acetylglucosamine1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RBG_16_Actinobacteria_68_12_curated
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Leptospira weilii serovar Ranarum str. ICFT RepID=N1WI19_9LEPT
13_1_20cm_4_scaffold_98_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23314..24165)
DNA (852bp) protein (284aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F092_CONWI
UDP-N-acetylglucosamine1-carboxyvinyltransferase
13_1_20cm_4_scaffold_98_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

24189..24653
DNA (465bp) protein (155aa)
Metal dependent phosphohydrolase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMN3_THEM7
metal dependent phosphohydrolase Tax=RBG_16_Actinobacteria_68_12_curated
HDIG: uncharacterized domain HDIG
Displaying 30 items

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