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13_1_20cm_4_scaffold_2040_4

Organism: 13_1_20CM_4_Verrucomicrobia_55_9

partial RP 14 / 55 MC: 2 BSCG 9 / 51 MC: 1 ASCG 4 / 38
Location: 3185..3595

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D199_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 132.0
  • Bit_score: 135
  • Evalue 4.50e-29
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19791.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428 UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 132.0
  • Bit_score: 135
  • Evalue 6.30e-29
putative RNA polymerase sigma factor, sigma-24-like protein similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 135.0
  • Bit_score: 102
  • Evalue 9.10e-20

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 411
ATGGAAATTTGGAACCAGGCGAAGAATTTTTCCGCTGAGAAAGGTAAGCCGCTGGGGTGGATGGTGACATTGACCCGCCGGCGGGCGATTGACGCATTGCGAAAAAAACAGGCTTATGCCCGCGCCGAAGAGCGTCTCCAAGCGCAACCGGAGCAGCAGCCCCTTGCCTGGGTGCAGAATGCGACCGAGAACGCCATTGAAGCCGGGGACACCCGCGTTCTAATGGCCAAAGTGATCAATTCTCTCCCCGTAGCCCAGCAGCAAGTGATCGAACTTGCATTTTTTCAGGGCATGAGCCAGCGCGAAATCGCTTCTCATACGAATATACCCTTGGGGACGGTAAAAACCCGGCTCGAATTAGGCTTGAAAAAGATCTACGACAGCTTGAAGGAGTTAAGAGATGAGTTTTGA
PROTEIN sequence
Length: 137
MEIWNQAKNFSAEKGKPLGWMVTLTRRRAIDALRKKQAYARAEERLQAQPEQQPLAWVQNATENAIEAGDTRVLMAKVINSLPVAQQQVIELAFFQGMSQREIASHTNIPLGTVKTRLELGLKKIYDSLKELRDEF*