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13_1_20cm_4_scaffold_2040

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2040_1
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1493)
DNA (1491bp) protein (497aa)
Alpha-amylase {ECO:0000313|EMBL:AJF05824.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterr
Trehalose synthase id=3727119 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
alpha-amylase
13_1_20cm_4_scaffold_2040_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1535..2107)
DNA (573bp) protein (191aa)
Trehalose synthase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ69_9BACT
Trehalose synthase {ECO:0000313|EMBL:EDY20760.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
trehalose synthase
13_1_20cm_4_scaffold_2040_3
unknown

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comp(2246..2611)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_20cm_4_scaffold_2040_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3185..3595
DNA (411bp) protein (137aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D199_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY19791.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428
putative RNA polymerase sigma factor, sigma-24-like protein
13_1_20cm_4_scaffold_2040_5
unknown

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3585..3842
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_4_scaffold_2040_6
unknown

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comp(3839..4324)
DNA (486bp) protein (162aa)

This feature has no annotations

13_1_20cm_4_scaffold_2040_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4326..4685)
DNA (360bp) protein (120aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP2_9BACT
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Elli
ATP-dependent Clp protease adapter protein ClpS
13_1_20cm_4_scaffold_2040_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4687..5139)
DNA (453bp) protein (151aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=497964 species="Bacteria; Ve
Endoribonuclease YbeY n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBP4_9BACT
hypothetical protein
13_1_20cm_4_scaffold_2040_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(5220..6500)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4V9D8_9DELT
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
13_1_20cm_4_scaffold_2040_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


6649..6942
DNA (294bp) protein (98aa)
50S ribosomal protein L35 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIW8_9BACT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdi
rpmI; ribosomal protein L35
13_1_20cm_4_scaffold_2040_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7329..7673
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744668
Uncharacterized protein {ECO:0000313|EMBL:EEF58566.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
13_1_20cm_4_scaffold_2040_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

7673..8791
DNA (1119bp) protein (373aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D365_9BACT
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:EDY19176.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
UBA/THIF-type NAD/FAD binding protein
13_1_20cm_4_scaffold_2040_13
unknown

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comp(8788..9324)
DNA (537bp) protein (179aa)

This feature has no annotations

13_1_20cm_4_scaffold_2040_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

9457..10074
DNA (618bp) protein (206aa)
Peptidoglycan-binding LysM n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D3Y6_9BACT
Peptidoglycan-binding LysM {ECO:0000313|EMBL:EDY18966.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
peptidoglycan-binding lysin domain-containing protein
13_1_20cm_4_scaffold_2040_15
unknown

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comp(10114..10551)
DNA (438bp) protein (146aa)

This feature has no annotations

Displaying 15 items

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