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13_1_20cm_4_scaffold_1010

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1010_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2..274
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003705BF9
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH82202.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_1010_2
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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274..1407
DNA (1134bp) protein (378aa)
Glucose 1-dehydrogenase {ECO:0000255|HAMAP-Rule:MF_02127}; Short=GDH {ECO:0000255|HAMAP-Rule:MF_02127};; Short=GlcDH {ECO:0000255|HAMAP-Rule:MF_02127};; EC=1.1.1.47 {ECO:0000255|HAMAP-Rule:MF_02127};;
Glucose 1-dehydrogenase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=GLCDH_METPS
glucose 1-dehydrogenase
13_1_20cm_4_scaffold_1010_3
unknown

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comp(1274..1660)
DNA (387bp) protein (129aa)

This feature has no annotations

13_1_20cm_4_scaffold_1010_4
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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1716..5240
DNA (3525bp) protein (1175aa)
hypothetical protein Tax=CSP1_4_Chloroflexi
hypothetical protein id=14629596 bin=bin8_Chloro species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
13_1_20cm_4_scaffold_1010_5
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(5245..6498)
DNA (1254bp) protein (418aa)
ABC transporter permease n=1 Tax=Patulibacter americanus RepID=UPI0003B649BA
Inner-membrane translocator {ECO:0000313|EMBL:ABX06970.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aura
inner-membrane translocator
13_1_20cm_4_scaffold_1010_6
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6495..7280)
DNA (786bp) protein (262aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B66BA2 rbh
ABC transporter {ECO:0000313|EMBL:AIJ22809.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
frcA; ABC transporter
13_1_20cm_4_scaffold_1010_7
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7363..8421)
DNA (1059bp) protein (353aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Patulibacter americanus RepID=UPI0003B57091
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ADP85006.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source=
LacI family transcriptional regulator
13_1_20cm_4_scaffold_1010_8
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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8549..9655
DNA (1107bp) protein (369aa)
hypothetical protein n=2 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003800D90
putative oxidoreductase Tax=CSP1_3_Armatimonadetes
oxidoreductase domain-containing protein
13_1_20cm_4_scaffold_1010_9
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

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9825..10880
DNA (1056bp) protein (352aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0XZ32_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB11868.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anop
glcD2; glycolate oxidase, subunit GlcD
13_1_20cm_4_scaffold_1010_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10877..11443
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B47932
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_1010_11
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11440..13041
DNA (1602bp) protein (534aa)
3-methylcrotonyl-CoA carboxylase subunit alpha n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4NX44_9CAUL
3-methylcrotonyl-CoA carboxylase subunit alpha {ECO:0000313|EMBL:ESQ79524.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;"
carbamoyl-phosphate synthase l chain ATP-binding protein
13_1_20cm_4_scaffold_1010_12
unknown

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comp(12981..13190)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 12 items

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