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13_1_20cm_4_scaffold_10204

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_10204_1
unknown

Not on your lists

1..372
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_4_scaffold_10204_2
Pantoea sp. GM01, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

544..1776
DNA (1233bp) protein (411aa)
Thioredoxin-disulfide reductase (EC:1.8.1.9)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00036357B3
Thioredoxin reductase {ECO:0000313|EMBL:EJL93687.1}; TaxID=1144320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. GM01.;"
13_1_20cm_4_scaffold_10204_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1763..2782
DNA (1020bp) protein (340aa)
Serine/threonine kinase n=1 Tax=Patulibacter medicamentivorans RepID=H0EAK7_9ACTN
Serine/threonine kinase {ECO:0000313|EMBL:EHN09334.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
hypothetical protein
13_1_20cm_4_scaffold_10204_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2775..3227
DNA (453bp) protein (151aa)
Dimethylhistidine N-methyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PM20_9DELT
Dimethylhistidine N-methyltransferase {ECO:0000313|EMBL:EPX64046.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter
hypothetical protein
13_1_20cm_4_scaffold_10204_5
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3188..3565
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI0003486496
Kitasatospora griseola strain MF730-N6 RKJC_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ65201.1}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatos
hypothetical protein
13_1_20cm_4_scaffold_10204_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3566..3853
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J5F0_FRASU
Uncharacterized protein {ECO:0000313|EMBL:ADP81894.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
hypothetical protein
13_1_20cm_4_scaffold_10204_7
unknown

Not on your lists

3895..4293
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_20cm_4_scaffold_10204_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4311..5195
DNA (885bp) protein (295aa)
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] Tax=RBG_16_Actinobacteria_68_12_curated
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWE8_RUBXD rbh
pyridoxal biosynthesis lyase PdxS
13_1_20cm_4_scaffold_10204_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(5480..6769)
DNA (1290bp) protein (430aa)
Glycosyl hydrolase BNR repeat-containing protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KT52_HALH1
glycosyl hydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
13_1_20cm_4_scaffold_10204_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6849..7970
DNA (1122bp) protein (374aa)
Probable transcriptional regulatory protein Rxyl_1318 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Y1318_RUBXD
hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
TIGR01033: DNA-binding regulatory protein, YebC/PmpR family
13_1_20cm_4_scaffold_10204_11
unknown

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comp(7972..8562)
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_20cm_4_scaffold_10204_12
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8596..9306)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JXW9_SACES
Uncharacterized protein {ECO:0000313|EMBL:CCH30157.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
hypothetical protein
13_1_20cm_4_scaffold_10204_13
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9303..10925)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JZY9_ARTS2
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:CCQ44913.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" s
hypothetical protein
13_1_20cm_4_scaffold_10204_14
unknown

Not on your lists

comp(10987..11196)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_4_scaffold_10204_15
unknown

Not on your lists

comp(11199..11408)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_4_scaffold_10204_16
unknown

Not on your lists

comp(11426..11638)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_4_scaffold_10204_17
unknown

Not on your lists

comp(11649..11774)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_20cm_4_scaffold_10204_18
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12234..12854)
DNA (621bp) protein (207aa)
FHA domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C6Z7_MYXFH
Adenylate cyclase {ECO:0000313|EMBL:AFE06061.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Coralloco
adenylate cyclase
13_1_20cm_4_scaffold_10204_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12891..13379
DNA (489bp) protein (163aa)
Holliday junction endonuclease RuvC (EC:3.1.22.4) Tax=RBG_16_Actinobacteria_68_12_curated
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY2_CONWI
13_1_20cm_4_scaffold_10204_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13376..13942
DNA (567bp) protein (189aa)
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12] Tax=RBG_16_Actinobacteria_68_12_curated
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY3_CONWI
Holliday junction DNA helicase RuvA
13_1_20cm_4_scaffold_10204_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13944..14954
DNA (1011bp) protein (337aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RBG_16_Actinobacteria_68_12_curated
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY4_CONWI rbh
Holliday junction DNA helicase RuvB
Displaying 21 items

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