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13_1_20cm_4_scaffold_151

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_151_1
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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3..293
-----------------
DNA (291bp)
protein (97aa)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:AEB12023.1}; EC=1.4.7.1 {ECO:0000313|EMBL:AEB12023.1};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marini
glutamate synthase (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NK52_MARHT
13_1_20cm_4_scaffold_151_2
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(310..1734)
-----------------
DNA (1425bp)
protein (475aa)
Ammonium transporter n=2 Tax=Leptospirillum PF1_9BACT">RepID=A3EPF1_9BACT rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1441628 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum YSK.;"
nrgA1; ammonium transporter
13_1_20cm_4_scaffold_151_3
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1731..2081)
-----------------
DNA (351bp)
protein (117aa)
nitrogen regulatory protein P-II 1 n=1 Tax=Sphingomonas RepID=UPI00028815CD
nitrogen regulatory protein P-II
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
13_1_20cm_4_scaffold_151_4
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2078..2575)
-----------------
DNA (498bp)
protein (166aa)
Sortase-like acyltransferase n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X2W5_9PSEU
Sortase-like acyltransferase {ECO:0000313|EMBL:EHR52107.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina
putative ArsR family transcriptional regulator
13_1_20cm_4_scaffold_151_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2583..4028)
-----------------
DNA (1446bp)
protein (482aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] Tax=RBG_16_Actinobacteria_68_12_curated
Glutamine synthetase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYA0_9BACT
GlnA; glutamine synthetase
13_1_20cm_4_scaffold_151_6
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(4138..5046)
-----------------
DNA (909bp)
protein (303aa)
Helix-turn-helix type 11 domain protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ECR4_9CHLR
Helix-turn-helix type 11 domain protein {ECO:0000313|EMBL:CCF82476.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitro
helix-turn-helix type 11 domain-containing protein
13_1_20cm_4_scaffold_151_7
unknown

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5062..5238
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

13_1_20cm_4_scaffold_151_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5235..5675
-----------------
DNA (441bp)
protein (147aa)
Cupin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D898_9EURY
cupin Tax=RBG_16_Actinobacteria_68_12_curated
cupin
13_1_20cm_4_scaffold_151_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5799..6617
-----------------
DNA (819bp)
protein (273aa)
ABC transporter related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYZ8_RUBXD
ABC transporter; K09687 antibiotic transport system ATP-binding protein Tax=RBG_16_Actinobacteria_68_12_curated
ABC transporter-like protein
13_1_20cm_4_scaffold_151_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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6614..7447
-----------------
DNA (834bp)
protein (278aa)
ABC-2 type transporter n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YXN6_9THEM
ABC transporter Tax=RBG_16_Actinobacteria_68_12_curated
ABC transporter
13_1_20cm_4_scaffold_151_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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7543..8820
-----------------
DNA (1278bp)
protein (426aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5R1_SPHTD
major facilitator superfamily protein Tax=RBG_16_Actinobacteria_68_12_curated
major facilitator superfamily protein
13_1_20cm_4_scaffold_151_12
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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comp(8791..9612)
-----------------
DNA (822bp)
protein (274aa)
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
dtdp-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] id=14625319 bin=bin7_NC10_sister species=Methanothermus fervidus genus=Methanothermus taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
spsK; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
13_1_20cm_4_scaffold_151_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(9561..10637)
-----------------
DNA (1077bp)
protein (359aa)
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_16_Actinobacteria_68_12_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BN27_9BACT
dTDP-glucose pyrophosphorylase
13_1_20cm_4_scaffold_151_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(10744..12903)
-----------------
DNA (2160bp)
protein (720aa)
Putative membrane protein mmpL3 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY27_THERP
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
putative membrane protein mmpL3
13_1_20cm_4_scaffold_151_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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12939..13376
-----------------
DNA (438bp)
protein (146aa)
Heat shock protein Hsp20 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF87_CONWI
Heat shock protein Hsp20 {ECO:0000313|EMBL:ADB53680.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter wo
heat shock protein Hsp20
13_1_20cm_4_scaffold_151_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13376..15847
-----------------
DNA (2472bp)
protein (824aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF86_CONWI
13_1_20cm_4_scaffold_151_17
unknown

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comp(15784..16239)
-----------------
DNA (456bp)
protein (152aa)

This feature has no annotations

13_1_20cm_4_scaffold_151_18
unknown

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16328..16765
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

13_1_20cm_4_scaffold_151_19
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16762..18168)
-----------------
DNA (1407bp)
protein (469aa)
metalloendopeptidase n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI000369B8BD
Metalloendopeptidase {ECO:0000313|EMBL:KGP76594.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
metalloendopeptidase-like membrane protein
13_1_20cm_4_scaffold_151_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18215..19414
-----------------
DNA (1200bp)
protein (400aa)
Putative membrane protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EB57_9ACTN
YibE/F family protein {ECO:0000313|EMBL:ADB54155.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source=
hypothetical protein
13_1_20cm_4_scaffold_151_21
unknown

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comp(19408..20670)
-----------------
DNA (1263bp)
protein (421aa)

This feature has no annotations

13_1_20cm_4_scaffold_151_22
unknown

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comp(20798..21031)
-----------------
DNA (234bp)
protein (78aa)

This feature has no annotations

Displaying 22 items

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