ggKbase home page

13_1_20cm_4_scaffold_2253

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2253_1
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..432)
DNA (432bp) protein (144aa)
AraC family transcriptional regulator n=1 Tax=Streptomyces sp. SS RepID=UPI00037B7783
AraC family transcriptional regulator {ECO:0000313|EMBL:KJY31792.1}; Flags: Fragment;; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Str
AraC family transcriptional regulator
13_1_20cm_4_scaffold_2253_2
unknown

Not on your lists

comp(774..1445)
DNA (672bp) protein (224aa)

This feature has no annotations

13_1_20cm_4_scaffold_2253_3
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1680..3167)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMG2_MICPN
Uncharacterized protein {ECO:0000313|EMBL:BAK36419.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (st
hypothetical protein
13_1_20cm_4_scaffold_2253_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(3334..3639)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3K2_CONWI
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_20cm_4_scaffold_2253_5
unknown

Not on your lists

comp(4127..4456)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_20cm_4_scaffold_2253_6
unknown

Not on your lists

5044..5946
DNA (903bp) protein (301aa)

This feature has no annotations

13_1_20cm_4_scaffold_2253_7
unknown

Not on your lists

5978..6490
DNA (513bp) protein (171aa)

This feature has no annotations

13_1_20cm_4_scaffold_2253_8
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6516..10376)
DNA (3861bp) protein (1287aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003626AEF
Uncharacterized protein {ECO:0000313|EMBL:KHK99949.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
TPR repeat-containing adenylate/guanylate cyclase
13_1_20cm_4_scaffold_2253_trna_3
unknown

Not on your lists

comp(10441..10513)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_2253_9

Not on your lists

comp(10520..11293)
DNA (774bp) protein (258aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK73886.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_4_scaffold_2253_trna_2
unknown

Not on your lists

comp(11347..11419)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_2253_10
Sporothrix schenckii, Sporothrix, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

comp(11508..12323)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) RepID=U7PS25_SPOS1
Uncharacterized protein {ECO:0000313|EMBL:ERS98377.1}; TaxID=1391915 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomatace
13_1_20cm_4_scaffold_2253_trna_1
unknown

Not on your lists

12959..13031
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_2253_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

13262..13585
DNA (324bp) protein (108aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5W1_CONWI
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:ADB52660.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" sour
TraR/DksA family transcriptional regulator
13_1_20cm_4_scaffold_2253_12
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13818..14720
DNA (903bp) protein (301aa)
5-dehydro-2-deoxygluconokinase n=1 Tax=Streptomyces rapamycinicus RepID=UPI0003831920
5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:KKA42745.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
5-dehydro-2-deoxygluconokinase
13_1_20cm_4_scaffold_2253_13
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

14717..15535
DNA (819bp) protein (273aa)
5-deoxy-glucuronate isomerase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFL2_9BACT
5-deoxy-glucuronate isomerase {ECO:0000313|EMBL:BAL54948.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
myo-inositol catabolism IolB domain-containing protein
13_1_20cm_4_scaffold_2253_14
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15532..16440
DNA (909bp) protein (303aa)
2-keto-myo-inositol dehydratase {ECO:0000313|EMBL:ABK53588.1}; EC=4.2.1.44 {ECO:0000313|EMBL:ABK53588.1};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus
2-keto-myo-inositol dehydratase n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVX8_ACIC1 rbh
xylose isomerase domain-containing protein
13_1_20cm_4_scaffold_2253_15
unknown

Not on your lists

comp(16437..16520)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 18 items

View Taxonomy