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13_1_20cm_4_scaffold_2985

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2985_1
unknown

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comp(3..221)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_20cm_4_scaffold_2985_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(281..1477)
DNA (1197bp) protein (399aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
seryl-tRNA synthetase (EC:6.1.1.11)
seryl-tRNA synthetase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEFE1
13_1_20cm_4_scaffold_2985_3
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1474..2214)
DNA (741bp) protein (247aa)
Putative hydrolase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DY35_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CCO07575.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam
cof family hydrolase
13_1_20cm_4_scaffold_2985_4
unknown

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comp(2292..4061)
DNA (1770bp) protein (590aa)

This feature has no annotations

13_1_20cm_4_scaffold_2985_5
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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4179..5087
DNA (909bp) protein (303aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Fra
Protease HtpX homolog n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L5F2_FRASN
heat shock protein HtpX
13_1_20cm_4_scaffold_2985_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5088..5657
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F235_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB50210.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_4_scaffold_2985_7
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5757..6212
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003754B08
Uncharacterized protein {ECO:0000313|EMBL:KEP24300.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
hypothetical protein
13_1_20cm_4_scaffold_2985_8
unknown

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6224..6397
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_20cm_4_scaffold_2985_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6397..7092
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037C39CD
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_2985_10
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

7089..8408
DNA (1320bp) protein (440aa)
Major facilitator transporter n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3T9_STRRD rbh
major facilitator transporter Tax=RBG_16_RIF_CHLX_72_14_curated
major facilitator transporter
13_1_20cm_4_scaffold_2985_11
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8408..9649
DNA (1242bp) protein (414aa)
MFS transporter n=1 Tax=Ruania albidiflava RepID=UPI0003B707BB
Uncharacterized protein {ECO:0000313|EMBL:KDP92442.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808
major facilitator transporter
13_1_20cm_4_scaffold_2985_12
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9561..10325)
DNA (765bp) protein (255aa)
Phage shock protein A n=1 Tax=Patulibacter medicamentivorans RepID=H0E905_9ACTN
Phage shock protein A {ECO:0000313|EMBL:EHN09858.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medi
phage shock protein A, PspA
13_1_20cm_4_scaffold_2985_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10385..11023
DNA (639bp) protein (213aa)
Beta-lactamase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCK9_CONWI
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB49482.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
beta-lactamase
13_1_20cm_4_scaffold_2985_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11020..12057)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG47_ANADF
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_4_scaffold_2985_15
unknown

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12099..12482
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_20cm_4_scaffold_2985_16
unknown

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comp(12484..12699)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_4_scaffold_2985_17
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13668..15716)
DNA (2049bp) protein (683aa)
histidine kinase n=1 Tax=Streptomyces clavuligerus RepID=UPI00020D9617
Sensor kinase {ECO:0000313|EMBL:AFI60304.1}; TaxID=1901 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus.;"
histidine kinase,GAF domain-containing protein
13_1_20cm_4_scaffold_2985_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16047..16604
DNA (558bp) protein (186aa)
cupin n=1 Tax=Patulibacter americanus RepID=UPI0003B54AEC
cupin Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_2985_19
unknown

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16755..17063
DNA (309bp) protein (103aa)

This feature has no annotations

Displaying 19 items

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