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13_1_20cm_4_scaffold_314

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_314_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3..560)
DNA (558bp) protein (186aa)
Metal dependent phosphohydrolase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8X2_CONWI
metal dependent phosphohydrolase; K09163 hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
metal dependent phosphohydrolase
13_1_20cm_4_scaffold_314_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(571..1212)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZ55_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB51820.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_4_scaffold_314_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1245..3044)
DNA (1800bp) protein (600aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBS5_CONWI
ABC transporter related protein {ECO:0000313|EMBL:ADB51340.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexiba
ABC transporter
13_1_20cm_4_scaffold_314_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3041..4840)
DNA (1800bp) protein (600aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBS6_CONWI
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RBG_16_Actinobacteria_68_12_curated
ABC transporter
13_1_20cm_4_scaffold_314_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4837..5445)
DNA (609bp) protein (203aa)
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Uracil-DNA glycosylase superfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5U1_SPHTD
uracil-DNA glycosylase superfamily
13_1_20cm_4_scaffold_314_6
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5442..6029)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KS67_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST34863.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
transcriptional regulator
13_1_20cm_4_scaffold_314_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6049..6951
DNA (903bp) protein (301aa)
putative glutamate formiminotransferase; K00603 glutamate formiminotransferase [EC:2.1.2.5] Tax=RBG_16_Actinobacteria_67_10_curated
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFA5_THET1
13_1_20cm_4_scaffold_314_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(6881..8137)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI000379C08A
Putative Transporter protein {ECO:0000313|EMBL:CCF83129.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" s
membrane transporter
13_1_20cm_4_scaffold_314_9
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

8164..9708
DNA (1545bp) protein (515aa)
Histidine ammonia-lyase {ECO:0000255|HAMAP-Rule:MF_00229}; Short=Histidase {ECO:0000255|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000255|HAMAP-Rule:MF_00229};; TaxID=251221 species="Bacteria; Cyanobacte
Histidine ammonia-lyase n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=HUTH_GLOVI
histidine ammonia-lyase
13_1_20cm_4_scaffold_314_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9705..11417
DNA (1713bp) protein (571aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RBG_16_Actinobacteria_68_12_curated
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] id=24471115 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
urocanate hydratase (EC:4.2.1.49)
13_1_20cm_4_scaffold_314_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

11414..12649
DNA (1236bp) protein (412aa)
Imidazolonepropionase {ECO:0000255|HAMAP-Rule:MF_00372}; EC=3.5.2.7 {ECO:0000255|HAMAP-Rule:MF_00372};; Imidazolone-5-propionate hydrolase {ECO:0000255|HAMAP-Rule:MF_00372}; TaxID=266117 species="Bact
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=HUTI_RUBXD
13_1_20cm_4_scaffold_314_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12654..13079
DNA (426bp) protein (142aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_314_13
unknown

Not on your lists

comp(13076..13417)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_20cm_4_scaffold_314_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13461..14096
DNA (636bp) protein (212aa)
Beta-lactamase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCS1_CONWI
beta-lactamase Tax=RBG_16_Actinobacteria_68_12_curated
beta-lactamase
13_1_20cm_4_scaffold_314_15
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists


14093..15082
DNA (990bp) protein (330aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RBG_16_Chloroflexi_64_32_curated
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=uncultured prokaryote RepID=H5SLH2_9ZZZZ
13_1_20cm_4_scaffold_314_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


15171..16922
DNA (1752bp) protein (584aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_16_Actinobacteria_68_12_curated
Aspartate--tRNA ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C339_SPHTD
aspartyl-tRNA synthetase
13_1_20cm_4_scaffold_314_17
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16962..17819
DNA (858bp) protein (286aa)
Large Ala/Glu-rich protein (Fragment) n=1 Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3BE60_STRMB
Large Ala/Glu-rich protein {ECO:0000313|EMBL:EME97854.1}; Flags: Fragment;; TaxID=1223523 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces m
large Ala/Glu-rich protein
13_1_20cm_4_scaffold_314_18
unknown

Not on your lists

17829..18425
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_20cm_4_scaffold_314_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

18437..18847
DNA (411bp) protein (137aa)
Rare lipoprotein A n=1 Tax=Patulibacter medicamentivorans RepID=H0E412_9ACTN
Rare lipoprotein A
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_314_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19031..20191
DNA (1161bp) protein (387aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterale
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCS6_CONWI
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
13_1_20cm_4_scaffold_314_21
unknown

Not on your lists

20213..20602
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_20cm_4_scaffold_314_22
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

20599..21366
DNA (768bp) protein (256aa)
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F264_CONWI
sigma-B/F/G subfamily RNA polymerase sigma-28 factor; K03090 RNA polymerase sigma-B factor Tax=RBG_13_Actinobacteria_63_9_curated
sigma-B/F/G subfamily RNA polymerase sigma-28 factor
13_1_20cm_4_scaffold_314_23
unknown

Not on your lists

21363..21599
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 23 items

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