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13_1_20cm_4_scaffold_3182

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3182_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1..513
DNA (513bp) protein (171aa)
glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] Tax=RBG_16_Actinobacteria_68_12_curated
Glutamine synthetase type I n=1 Tax=Patulibacter medicamentivorans RepID=H0E850_9ACTN
glutamine synthetase
13_1_20cm_4_scaffold_3182_2
unknown

Not on your lists

comp(746..1000)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_4_scaffold_3182_3
unknown

Not on your lists

comp(1058..1192)
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_20cm_4_scaffold_3182_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1373..1849)
DNA (477bp) protein (159aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_3182_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1871..3274
DNA (1404bp) protein (468aa)
Signal transduction histidine kinase Tax=RBG_16_Actinobacteria_67_10_curated
Signal transduction histidine kinase id=14631717 bin=bin9_gal15 species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
13_1_20cm_4_scaffold_3182_6
unknown

Not on your lists

comp(3474..3899)
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_20cm_4_scaffold_3182_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3962..4528
DNA (567bp) protein (189aa)
Two-component system, regulatory protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YE74_DICT6
response regulator receiver and ANTAR domain-containing protein; K07183 response regulator NasT Tax=RBG_16_Actinobacteria_67_10_curated
two-component system, regulatory protein
13_1_20cm_4_scaffold_3182_8
unknown

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comp(4525..4827)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_20cm_4_scaffold_3182_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(4878..6767)
DNA (1890bp) protein (630aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8W6_CONWI
ABC transporter; K06158 ATP-binding cassette, subfamily F, member 3 Tax=RBG_16_Actinobacteria_67_10_curated
ABC transporter
13_1_20cm_4_scaffold_3182_10
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6788..8005
DNA (1218bp) protein (406aa)
Carbohydrate kinase, FGGY n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVE2_RUBXD
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:ABG04636.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubr
carbohydrate kinase
13_1_20cm_4_scaffold_3182_11
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(8076..9503)
DNA (1428bp) protein (476aa)
Transketolase central region n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEI0_THET1
Transketolase central region {ECO:0000313|EMBL:ACZ41336.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
transketolase
13_1_20cm_4_scaffold_3182_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

9806..10258
DNA (453bp) protein (151aa)
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:CDM65716.1}; EC=5.3.1.6 {ECO:0000313|EMBL:CDM65716.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" sour
rpiB; ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5W9_ANATU
13_1_20cm_4_scaffold_3182_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

10251..11363
DNA (1113bp) protein (371aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2] Tax=RBG_16_Actinobacteria_67_10_curated
Transaldolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZZ9_RUBXD
transaldolase
13_1_20cm_4_scaffold_3182_14
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

11363..12709
DNA (1347bp) protein (449aa)
transaldolase; K13810 transaldolase / glucose-6-phosphate isomerase [EC:2.2.1.2 5.3.1.9] Tax=RBG_16_Chloroflexi_64_32_curated
putative glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA76_9BACT
13_1_20cm_4_scaffold_3182_15
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

12712..13617
DNA (906bp) protein (302aa)
6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00030893B8
13_1_20cm_4_scaffold_3182_16
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

13670..15127
DNA (1458bp) protein (486aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
zwf; glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0S2_THERP
13_1_20cm_4_scaffold_3182_17
unknown

Not on your lists

15112..15852
DNA (741bp) protein (247aa)

This feature has no annotations

13_1_20cm_4_scaffold_3182_18
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15849..16613
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A2699
Uncharacterized protein {ECO:0000313|EMBL:KGS04880.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" sourc
hypothetical protein
13_1_20cm_4_scaffold_3182_19
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

16603..17193
DNA (591bp) protein (197aa)
Translation elongation factor P n=1 Tax=planctomycete KSU-1 RepID=I3IGD2_9PLAN
hypothetical protein Tax=RBG_13_Euryarchaeota_31_8_curated
hypothetical protein
13_1_20cm_4_scaffold_3182_20
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

17193..18020
DNA (828bp) protein (276aa)
acetyltransferase Tax=RBG_16_Actinobacteria_70_17_curated
GCN5-related N-acetyltransferase id=2552368 bin=GWA1_Deltaproteobacteria_52_35 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
GCN5-related N-acetyltransferase
13_1_20cm_4_scaffold_3182_21
unknown

Not on your lists

comp(18017..19957)
DNA (1941bp) protein (647aa)

This feature has no annotations

13_1_20cm_4_scaffold_3182_22
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(20015..20992)
DNA (978bp) protein (326aa)
amidase (EC:3.5.1.4)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E17923
Tax=BJP_IG2157_Anaerolineales_55_23
13_1_20cm_4_scaffold_3182_23
unknown

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comp(21005..22660)
DNA (1656bp) protein (552aa)

This feature has no annotations

13_1_20cm_4_scaffold_3182_24
unknown

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comp(22694..22855)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_20cm_4_scaffold_3182_25
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(22956..23900)
DNA (945bp) protein (315aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-); K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3N1_THERP
13_1_20cm_4_scaffold_3182_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23893..25521)
DNA (1629bp) protein (543aa)
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:ADB50335.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ADB50335.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexiba
cytochrome C oxidase subunit I (EC:1.9.3.1)
Cytochrome c oxidase, subunit I n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F355_CONWI
13_1_20cm_4_scaffold_3182_27
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(25511..26515)
DNA (1005bp) protein (335aa)
cytochrome c oxidase subunit II (EC:1.9.3.1); K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RBG_16_Actinobacteria_68_21_curated
Cytochrome c oxidase subunit 2 n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CV76_TRURR
cytochrome c oxidase subunit II
13_1_20cm_4_scaffold_3182_28
unknown

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26583..26798
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_20cm_4_scaffold_3182_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(26819..27397)
DNA (579bp) protein (193aa)
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1772B
two component transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
czcR; winged-helix heavy metal transcriptional response regulator
13_1_20cm_4_scaffold_3182_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

27412..28083
DNA (672bp) protein (224aa)
two-component sensor histidine kinase PhoR; K07636 two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] Tax=RBG_16_Actinobacteria_68_12_curated
phoR1; phosphate sensory box histidine kinase PhoR (EC:2.7.3.-)
Phosphate sensory box histidine kinase PhoR n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GF59_SORC5
Displaying items 1-30 of 33 in total

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