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13_1_20cm_4_scaffold_3558

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3558_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..363)
DNA (363bp) protein (121aa)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RBG_16_Actinobacteria_68_12_curated
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MES6_9BACT
13_1_20cm_4_scaffold_3558_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

385..2154
DNA (1770bp) protein (590aa)
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0K9_CONWI
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADB53943.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexib
carbamoyl-phosphate synthase L chain ATP-binding protein
13_1_20cm_4_scaffold_3558_3
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2141..2731)
DNA (591bp) protein (197aa)
TetR family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B56B04
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EAR51999.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" sour
transcriptional regulator
13_1_20cm_4_scaffold_3558_4
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2758..3126
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CH13_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAR51998.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulos
hypothetical protein
13_1_20cm_4_scaffold_3558_5
unknown

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3075..3251
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_4_scaffold_3558_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3299..4441
DNA (1143bp) protein (381aa)
succinyl-CoA synthetase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5] Tax=RBG_16_Actinobacteria_68_12_curated
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=SUCC_RUBXD
sucCoAbeta: succinate-CoA ligase, beta subunit
13_1_20cm_4_scaffold_3558_7
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4438..5091
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036DD68B
Methyltransferase type 11 {ECO:0000313|EMBL:EAT14932.1}; TaxID=281689 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfu
ycgJ; ubiquinone/menaquinone biosynthesis methyltransferase
13_1_20cm_4_scaffold_3558_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5093..5971
DNA (879bp) protein (293aa)
succinyl-CoA synthetase subunit alpha; K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=RBG_16_Actinobacteria_68_12_curated
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0L5_CONWI
succinyl-CoA synthetase subunit alpha
13_1_20cm_4_scaffold_3558_9
unknown

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5979..6281
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_20cm_4_scaffold_3558_10
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

6332..7288
DNA (957bp) protein (319aa)
PKD domain containing protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FM06_9EURY
cell surface protein Tax=AR4
13_1_20cm_4_scaffold_3558_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

7368..8405
DNA (1038bp) protein (346aa)
Putative transcriptional regulator of pyridoxine metabolism n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ESH6_MODMB
GntR family transcriptional regulator Tax=RBG_16_Actinobacteria_67_10_curated
transcriptional regulator of pyridoxine metabolism
13_1_20cm_4_scaffold_3558_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8636..9658)
DNA (1023bp) protein (341aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPT6_ACEAZ
PDZ/DHR/GLGF domain-containing protein; K07177 PDZ domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
PDZ/DHR/GLGF domain-containing protein
13_1_20cm_4_scaffold_3558_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9658..10401)
DNA (744bp) protein (248aa)
short-chain dehydrogenase/reductase sdr; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RBG_16_Actinobacteria_67_10_curated
3-oxoacyl-ACP reductase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI00036D9B09
13_1_20cm_4_scaffold_3558_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10405..11328)
DNA (924bp) protein (308aa)
malate dehydrogenase (NAD) (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] Tax=RBG_16_Actinobacteria_68_12_curated
Malate dehydrogenase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2T1_SPHTD rbh
malate dehydrogenase, NAD-dependent
13_1_20cm_4_scaffold_3558_15
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(11321..12229)
DNA (909bp) protein (303aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.41) Tax=RBG_16_Chloroflexi_58_8_curated
isocitrate dehydrogenase (NADP) (EC:1.1.1.41)
Isocitrate dehydrogenase id=4704271 bin=GWC2_Planctomycetes_45_44 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Displaying 15 items

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