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13_1_20cm_4_scaffold_4890

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4890_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..258)
DNA (258bp) protein (86aa)
cda, zgc:77948; cytidine deaminase (EC:3.5.4.5); K01489 cytidine deaminase [EC:3.5.4.5] Tax=RBG_16_Actinobacteria_68_12_curated
Cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=18 Tax=Staphylococcus epidermidis RepID=E6JMI9_STAEP
13_1_20cm_4_scaffold_4890_2
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(255..962)
DNA (708bp) protein (236aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107] Tax=RBG_16_Actinobacteria_64_13_curated
bifunctional diacylglycerol kinase/phosphatase B n=1 Tax=[Clostridium] glycolicum RepID=UPI000372F2C2
diacylglycerol kinase
13_1_20cm_4_scaffold_4890_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(959..1198)
DNA (240bp) protein (80aa)
metalloprotein Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_4890_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1204..2154)
DNA (951bp) protein (317aa)
PhoH family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAV5_CONWI
PhoH family protein {ECO:0000313|EMBL:ADB51268.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei
PhoH family protein
13_1_20cm_4_scaffold_4890_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2163..2606)
DNA (444bp) protein (148aa)
GatB/Yqey domain protein; K09117 hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
Uncharacterized protein id=2720317 bin=GWA1_ZB2_49_26 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_4890_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2603..2884)
DNA (282bp) protein (94aa)
Histidine triad (HIT) protein n=1 Tax=Nocardioides sp. CF8 RepID=R7XYC0_9ACTO
HIT family hydrolase Tax=RBG_16_Actinobacteria_68_12_curated
Hit-family protein
13_1_20cm_4_scaffold_4890_7
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2925..4109)
DNA (1185bp) protein (395aa)
MiaB family protein, possibly involved in tRNA or rRNA modification n=1 Tax=Rhodovulum sp. PH10 RepID=J6L8U5_9RHOB
MiaB family protein, possibly involved in tRNA or rRNA modification {ECO:0000313|EMBL:EJW09908.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
MiaB-like tRNA modifying enzyme
13_1_20cm_4_scaffold_4890_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4122..4820)
DNA (699bp) protein (233aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAV0_CONWI
ribosomal L11 methyltransferase
13_1_20cm_4_scaffold_4890_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4883..5833)
DNA (951bp) protein (317aa)
Chaperone protein DnaJ n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAU9_CONWI
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexi
chaperone protein DnaJ
13_1_20cm_4_scaffold_4890_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5995..6444)
DNA (450bp) protein (150aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAU8_CONWI
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
heat-inducible transcription repressor HrcA
13_1_20cm_4_scaffold_4890_11
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6892..7998)
DNA (1107bp) protein (369aa)
Putative oxygen-independent coproporphyrinogen-III oxidase {ECO:0000313|EMBL:CCH70840.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CCH70840.1};; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; I
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00037E0D21
radical SAM superfamily protein
13_1_20cm_4_scaffold_4890_12
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7995..8807)
DNA (813bp) protein (271aa)
Elongation factor 4 {ECO:0000255|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000255|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000255|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000255|HAMAP
GTP-binding protein LepA n=1 Tax=Desulfurispora thermophila RepID=UPI0003815B80
lepA; GTP-binding protein LepA
Displaying 12 items

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