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13_1_20cm_4_scaffold_5268

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5268_1
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

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comp(3..164)
DNA (162bp) protein (54aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B7I3_HERA2
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABX02956.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosip
NAD-dependent epimerase/dehydratase
13_1_20cm_4_scaffold_5268_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(164..1489)
DNA (1326bp) protein (442aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE51_CONWI
MiaB family RNA modification protein
13_1_20cm_4_scaffold_5268_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1498..2133
DNA (636bp) protein (212aa)
RhtB family transporter n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7D3A0_AGRT5
Homoserine/homoserine lactone efflux protein {ECO:0000313|EMBL:KJX89994.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
RhtB family transporter
13_1_20cm_4_scaffold_5268_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2044..3687)
DNA (1644bp) protein (548aa)
metal dependent phosphohydrolase (EC:3.1.4.16)
Ribonuclease Y n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE50_CONWI
phosphodiesterase; K06950 uncharacterized protein Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_5268_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(3938..4525)
DNA (588bp) protein (196aa)
Regulatory protein RecX n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0CI29_ALCDB
recX; Regulatory protein RecX; K03565 regulatory protein Tax=RBG_16_Actinobacteria_67_10_curated
recX; regulatory protein recX
13_1_20cm_4_scaffold_5268_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(4532..5332)
DNA (801bp) protein (267aa)
Protein RecA n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LUA7_TEPAE
recA protein; K03553 recombination protein RecA Tax=RBG_16_Actinobacteria_68_12_curated
recombinase A
13_1_20cm_4_scaffold_5268_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(5487..6041)
DNA (555bp) protein (185aa)
2''''-5'''' RNA ligase n=1 Tax=Pseudomonas stutzeri RepID=UPI0002D4A806
ligT; 2'-5' RNA ligase
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_5268_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6038..7309)
DNA (1272bp) protein (424aa)
CinA-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVH9_PSEUX
competence/damage-inducible molybdopterin binding CinA-like protein; K03742 competence/damage-inducible protein CinA Tax=RBG_16_Actinobacteria_68_12_curated
competence/damage-inducible protein CinA
13_1_20cm_4_scaffold_5268_9
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7306..8028)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00037BBB7C
hypothetical protein Tax=RBG_16_Actinobacteria_64_13_curated
XRE family transcriptional regulator
13_1_20cm_4_scaffold_5268_10
unknown

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comp(8053..8400)
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_20cm_4_scaffold_5268_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8426..9484)
DNA (1059bp) protein (353aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Clostridium sp. BL8 RepID=T0PQQ7_9CLOT
sugar ABC transporter permease; K02057 simple sugar transport system permease protein Tax=RBG_16_Actinobacteria_68_12_curated
rbsC; ribose transport system permease protein rbsC
13_1_20cm_4_scaffold_5268_12
unknown

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comp(9457..10755)
DNA (1299bp) protein (433aa)

This feature has no annotations

Displaying 12 items

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