ggKbase home page

13_1_20cm_4_scaffold_758

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_758_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

2..760
DNA (759bp) protein (253aa)
HTH-type transcriptional regulator malT Tax=CSP1_3_Armatimonadetes
HTH-type transcriptional regulator malT id=14633167 bin=bin9_gal15 species=Actinoplanes globisporus genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
LuxR family transcriptional regulator
13_1_20cm_4_scaffold_758_2
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

812..1069
DNA (258bp) protein (86aa)
UPI0003CDD523 related cluster n=1 Tax=unknown RepID=UPI0003CDD523
Uncharacterized protein {ECO:0000313|EMBL:ESW82553.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
13_1_20cm_4_scaffold_758_3
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1079..1486
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FCJ0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESX64327.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
hypothetical protein
13_1_20cm_4_scaffold_758_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(1483..2697)
DNA (1215bp) protein (405aa)
glycosyltransferase Tax=RBG_16_Actinobacteria_67_10_curated
glycosyltransferase id=12557116 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyltransferase
13_1_20cm_4_scaffold_758_5
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(2684..3622)
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNJ7_ROSCS
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABU59138.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Ros
NAD-dependent epimerase/dehydratase
13_1_20cm_4_scaffold_758_6
unknown

Not on your lists

comp(3610..4878)
DNA (1269bp) protein (423aa)

This feature has no annotations

13_1_20cm_4_scaffold_758_7
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

4901..6199
DNA (1299bp) protein (433aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
13_1_20cm_4_scaffold_758_8
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

6196..7329
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-D5 RepID=UPI00035C3C55
group 1 glycosyl transferase Tax=RBG_16_Chloroflexi_64_43_curated
group 1 glycosyl transferase
13_1_20cm_4_scaffold_758_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

7326..8429
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-D5 RepID=UPI00037F9F95
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
group 1 glycosyl transferase
13_1_20cm_4_scaffold_758_10
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8436..9326
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-D5 RepID=UPI000363A74A
Polysaccharide deacetylase {ECO:0000313|EMBL:AEG16784.1}; Flags: Precursor;; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfot
polysaccharide deacetylase
13_1_20cm_4_scaffold_758_11
unknown

Not on your lists

9326..10201
DNA (876bp) protein (292aa)

This feature has no annotations

13_1_20cm_4_scaffold_758_12
R_OD1_Falkowbacteria_47_11b, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

10204..11199
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-D5 RepID=UPI000378AF12
group 1 glycosyl transferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_47_11b_curated
13_1_20cm_4_scaffold_758_13
unknown

Not on your lists

comp(11025..11924)
DNA (900bp) protein (300aa)

This feature has no annotations

13_1_20cm_4_scaffold_758_14
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(12174..13208)
DNA (1035bp) protein (345aa)
Glycosyltransferase n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TL25_9CYAN
glycosyltransferase Tax=RBG_16_Chloroflexi_64_43_curated
glycosyltransferase
13_1_20cm_4_scaffold_758_15
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13205..14437)
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W166_9CYAN id=133667 bin=ACD81 species=Coleofasciculus chthonoplastes genus=Coleofasciculus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
glycosyl transferase family protein Tax=CG_Solirubrobact_01
hypothetical protein
13_1_20cm_4_scaffold_758_16
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14454..16289)
DNA (1836bp) protein (612aa)
Asparagine synthetase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B1Z0_STRRD
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:ACZ89214.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Strep
asparagine synthase
13_1_20cm_4_scaffold_758_17
R_OD1_Kaiserbacteria_48_10, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16837..17463)
DNA (627bp) protein (209aa)
Methyltransferase type 12 n=1 Tax=uncultured bacterium RepID=K2DS34_9BACT
methyltransferase type 11 Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_48_10_curated
methyltransferase type 11
13_1_20cm_4_scaffold_758_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17490..19001
DNA (1512bp) protein (504aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:ADB53921.1}; EC=2.7.8.6 {ECO:0000313|EMBL:ADB53921.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleo
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZT3_CONWI
13_1_20cm_4_scaffold_758_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18978..20495)
DNA (1518bp) protein (506aa)
hypothetical protein n=1 Tax=Fervidibacteria bacterium JGI 0000001-D5 RepID=UPI0003771145
copper amine oxidase-like domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
copper amine oxidase-like domain-containing protein
13_1_20cm_4_scaffold_758_20
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20614..21267
DNA (654bp) protein (218aa)
Polysaccharide deacetylase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4Z4_CONWI
Polysaccharide deacetylase {ECO:0000313|EMBL:ADB48572.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" so
polysaccharide deacetylase
13_1_20cm_4_scaffold_758_21
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

21281..22498
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46GH0_METBF rbh
hypothetical protein Tax=CG_Arma_02
hypothetical protein
13_1_20cm_4_scaffold_758_22
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

22491..23231
DNA (741bp) protein (247aa)
family 2 glycosyl transferase Tax=GWC2_Nitrospirae_56_14_curated
Glycosyl transferase family 2 id=2590826 bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
family 2 glycosyl transferase
13_1_20cm_4_scaffold_758_23
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23228..23575
DNA (348bp) protein (116aa)
Putative uncharacterized protein id=3643111 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=BJP_IG2158_Thermincola_46_17
13_1_20cm_4_scaffold_758_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(23572..25245)
DNA (1674bp) protein (558aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_758_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(25242..26162)
DNA (921bp) protein (307aa)
fcl; GDP-L-fucose synthase (EC:1.1.1.271)
nucleoside-diphosphate-sugar epimerase Tax=RBG_16_Actinobacteria_68_12_curated
NAD-dependent epimerase/dehydratase id=2269548 bin=GWB2_Elusimicrobium_63_22 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
13_1_20cm_4_scaffold_758_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(26159..27304)
DNA (1146bp) protein (382aa)
rfbB2; dTDP-glucose-46-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RBG_16_Actinobacteria_68_12_curated
rfbB2; dTDP-glucose-46-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Halorubrum sp. T3 RepID=UPI00037CDB5F rbh
13_1_20cm_4_scaffold_758_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

27396..28631
DNA (1236bp) protein (412aa)
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 27 items

View Taxonomy