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13_1_20cm_4_scaffold_11259_1

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: 1..510

Top 3 Functional Annotations

Value Algorithm Source
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 162.0
  • Bit_score: 280
  • Evalue 1.50e-72
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Megamonas rupellensis RepID=UPI00036FF29A similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 133.0
  • Bit_score: 165
  • Evalue 5.10e-38
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 135.0
  • Bit_score: 166
  • Evalue 8.40e-39

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGGCGCCCTGCTCGTCGACGGCATCGGCGACACGATGCGCGTCTCGCTAACCGCCGACCCCGTGGAAGAGGTCAGGGTCGCGTTCGAGATCCTCAAATCGCTCGGGCTGCGCGAGCGCGGGCCGGTCATGATCGCGTGCCCGTCCTGCGGCCGCGACAACGTCGGCGTGCAGACGCTCGCGGAGCTGGTCGAGGAACGGCTGCACGCGTACCCGCAGCACTTCGAGGTCGCCGTGCTCGGCTGCGCCGTCAACGGTCCCGGCGAGGCGGGCGACGCCGACTTCGGCATCGCCGGCGGACGCGACACGGGCTTCGTGTATGCGCACGGCCGCGTGCTGAAGAAGGTTTCGTCCGACATCCTGATCGACGAGCTGTTCGACGAGATCGACAAGTGGATCGCCGACGGCATGCAACGCCCGAAGCGACTGAAGATGGCGAAGCCCGCTGCGCTCGCAATGGCAGAAGCCTCTTTGATTCCGTTGGAGTCGGTCCCAAGCGATGTGGATTAA
PROTEIN sequence
Length: 170
MGALLVDGIGDTMRVSLTADPVEEVRVAFEILKSLGLRERGPVMIACPSCGRDNVGVQTLAELVEERLHAYPQHFEVAVLGCAVNGPGEAGDADFGIAGGRDTGFVYAHGRVLKKVSSDILIDELFDEIDKWIADGMQRPKRLKMAKPAALAMAEASLIPLESVPSDVD*