ggKbase home page

13_1_20cm_4_scaffold_11259

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_11259_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1..510
DNA (510bp) protein (170aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=RBG_16_Actinobacteria_68_12_curated
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Megamonas rupellensis RepID=UPI00036FF29A
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
13_1_20cm_4_scaffold_11259_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

587..1177
DNA (591bp) protein (197aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RBG_16_Actinobacteria_68_12_curated
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE7_CONWI
13_1_20cm_4_scaffold_11259_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


1224..2123
DNA (900bp) protein (300aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) Tax=RBG_16_Actinobacteria_68_12_curated
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15)
Proline--tRNA ligase id=3208742 bin=GWC2_Nitrospirae_57_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
13_1_20cm_4_scaffold_11259_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2123..2422
DNA (300bp) protein (100aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_11259_trna_1
unknown

Not on your lists

2639..2713
DNA (75bp)
transferRNA
13_1_20cm_4_scaffold_11259_5
unknown

Not on your lists

3086..3295
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_20cm_4_scaffold_11259_6
unknown

Not on your lists

comp(3398..3721)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_4_scaffold_11259_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5005..5772)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YBX2_SORCE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
13_1_20cm_4_scaffold_11259_8
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5866..6705
DNA (840bp) protein (280aa)
Probable DNA repair protein L323_02755 n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R6R2_9CLOT
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostrid
Ku protein
13_1_20cm_4_scaffold_11259_9
unknown

Not on your lists

comp(6702..6815)
DNA (114bp) protein (38aa)

This feature has no annotations

13_1_20cm_4_scaffold_11259_10
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6877..7962
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037B6BE3
Cytochrome c551/c552 {ECO:0000313|EMBL:CEL17176.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.
hypothetical protein
13_1_20cm_4_scaffold_11259_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7836..8774)
DNA (939bp) protein (313aa)
Amidohydrolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYH2_RUBXD
N-formimino-L-glutamate deiminase Tax=RBG_16_Actinobacteria_68_12_curated
N-formimino-L-glutamate deiminase
13_1_20cm_4_scaffold_11259_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8796..9350
DNA (555bp) protein (185aa)
pgsA2; hypothetical protein; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RBG_16_Actinobacteria_68_12_curated
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase id=14428635 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
putative phosphatidylglycerophosphate synthase
13_1_20cm_4_scaffold_11259_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9347..11479
DNA (2133bp) protein (711aa)
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Actinobacteria_68_12_curated
Nucleotidyl transferase n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YB45_THEBD
nucleotidyl transferase
Displaying 14 items

View Taxonomy