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13_1_20cm_4_scaffold_516_17

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: 11591..12511

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVP0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 172.0
  • Bit_score: 100
  • Evalue 3.60e-18
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 154.0
  • Bit_score: 157
  • Evalue 3.50e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 314.0
  • Bit_score: 106
  • Evalue 1.10e-20

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGGCCACGATCGCCCCTGAAATCCCCGTCCTAGCTCGGGACGAGGCGTTCGAACAGCTCTACCGACGGTACGTCAAGGACGTCTATCACTACGCCCTGGCGCTGCTGCGCAACCCGGCCGACGCGGAGGACGTCACGCAGACGACGTTCCTCAACGCGTACCGCGCGTTTCAGCGCGGGGAGGAGATCCTCAAGCCGCAGAACTGGCTGATCAAGATCGCGCACAACGTCGCACGCTCGCGCTATGCGCGCATCAGCCGCCGCGTGAAGGAAGTGCCGCTGGAGGAGCACGTCGAGCAGCTGGCAATTCCCGAAGAGGAGAAGCCCAACGTCGAGGGCGTCCTCCGGGCGCTCGGCCGGCTGCCCTTCAACCAGCGAGCGGCGCTCGTCATGCGCGAGCTCGAAGGGCGTTCGTACACGGAGATCGCCGACACGCTCGGCGTCTCGGTCGCCGCCGTGGAGACGTTGATCTTCCGTGCGCGCAGATCCCTGCGGGTCCGCACGGCCGCGCTCCGCTCGATCCTGGCGATCCCGGTCCCCGGCTCGCTCGCCCAGCTGTTCGGGGGCGGCAGCGCCGCCGTGGGCGGGCTCGGCGCGAGCATGCTGATCAAGGCCGCCGTTGCGCTCGTCGTCGGCGGCCTCGCGACGGGTCTCGGCGTCGAGCGAGCCACGCACGCGAACGCGGCGCCGCGCCCGGCTTTGGCTTCGGCCGCGCCTGCAGCGAGTGGCGCCGCCGCAAGCGCCGCCGGGCCGAGAGCCCGAACCGCGAAGCCGCACAAGGCCGCCGCTGCGCGGGTGGCGCGGGCCGCACTCGCGAAGCGCGCGCCGGTCAAGGGTCTGAAGCTCGGTCCGGCGTCCCGCCAGCGTTCGTCGGCGCCGGTCGAGGTTGCAGCGTCAGCGTCAGCCTCGGCCTCGGCTCCC
PROTEIN sequence
Length: 307
MATIAPEIPVLARDEAFEQLYRRYVKDVYHYALALLRNPADAEDVTQTTFLNAYRAFQRGEEILKPQNWLIKIAHNVARSRYARISRRVKEVPLEEHVEQLAIPEEEKPNVEGVLRALGRLPFNQRAALVMRELEGRSYTEIADTLGVSVAAVETLIFRARRSLRVRTAALRSILAIPVPGSLAQLFGGGSAAVGGLGASMLIKAAVALVVGGLATGLGVERATHANAAPRPALASAAPAASGAAASAAGPRARTAKPHKAAAARVARAALAKRAPVKGLKLGPASRQRSSAPVEVAASASASASAP