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13_1_20cm_4_scaffold_516

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_516_1
unknown

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3..143
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_20cm_4_scaffold_516_2
Gordonia terrae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(127..954)
DNA (828bp) protein (276aa)
Putative membrane protein n=1 Tax=Gordonia sp. KTR9 RepID=J9RLE4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EON32813.1}; TaxID=1316928 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia terrae C-6.;"
hypothetical protein
13_1_20cm_4_scaffold_516_3
unknown

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comp(1052..1339)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_20cm_4_scaffold_516_4
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1329..1727)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EQW4_STRRM
Putative integral membrane protein {ECO:0000313|EMBL:EWC63924.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora sp
hypothetical protein
13_1_20cm_4_scaffold_516_5
unknown

Not on your lists

comp(1708..2073)
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_20cm_4_scaffold_516_6
Thermus sp. 2.9, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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2258..2719
DNA (462bp) protein (154aa)
Arginine repressor n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZPY2_THETH
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1577051 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. 2.9.;"
transcriptional repressor
13_1_20cm_4_scaffold_516_7
unknown

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comp(2716..3120)
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_20cm_4_scaffold_516_8
unknown

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comp(3117..3758)
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_20cm_4_scaffold_516_9
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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3783..4754
DNA (972bp) protein (324aa)
Pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1)
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M6R0_9BACL
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha {ECO:0000313|EMBL:EST54271.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" so
13_1_20cm_4_scaffold_516_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4847..5833
DNA (987bp) protein (329aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component beta subunit (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_16_Actinobacteria_68_12_curated
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3BF1F
pyruvate dehydrogenase
13_1_20cm_4_scaffold_516_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5823..7070
DNA (1248bp) protein (416aa)
pdhC; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) (EC:2.3.1.12) Tax=
catalytic domain of components of various dehydrogenase complexes; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=14430290 bin=bin3_NC10 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
catalytic domain of components of various dehydrogenase complexes
13_1_20cm_4_scaffold_516_12
unknown

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7073..7405
DNA (333bp) protein (111aa)

This feature has no annotations

13_1_20cm_4_scaffold_516_13
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7380..8237
DNA (858bp) protein (286aa)
UPI0003D000EA related cluster n=1 Tax=unknown RepID=UPI0003D000EA
Uncharacterized protein {ECO:0000313|EMBL:ETA00801.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
hypothetical protein
13_1_20cm_4_scaffold_516_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8459..8905
DNA (447bp) protein (149aa)
GCN5-related protein N-acetyltransferase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C0C3_BEUC1
acetyltransferase Tax=RBG_16_Actinobacteria_68_12_curated
N-acetyltransferase GCN5
13_1_20cm_4_scaffold_516_15
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

9012..10418
DNA (1407bp) protein (469aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacte
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Acetoin dehydrogenase E3 component n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QAZ3_9FIRM
13_1_20cm_4_scaffold_516_16
unknown

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comp(10402..11505)
DNA (1104bp) protein (368aa)

This feature has no annotations

13_1_20cm_4_scaffold_516_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11591..12511
DNA (921bp) protein (307aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVP0_9BACT
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_16_Actinobacteria_68_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
Displaying 17 items

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