ggKbase home page

13_1_20cm_2_scaffold_1530

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1530_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2..634)
DNA (633bp) protein (211aa)
Glucose sorbosone dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPQ4_9BACT
glucose sorbosone dehydrogenase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
glucose sorbosone dehydrogenase
13_1_20cm_2_scaffold_1530_2
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

768..1121
DNA (354bp) protein (118aa)
dhmA2; Haloalkane dehalogenase 2 (EC:3.8.1.5)
Putative hydrolase or acyltransferase n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J4TD74_9MYCO
Alpha/beta hydrolase fold {ECO:0000313|EMBL:CEL20631.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126
13_1_20cm_2_scaffold_1530_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1170..1679
DNA (510bp) protein (170aa)
id=3864200 Tax=GWC2_Rokubacteria_70_16_curated
13_1_20cm_2_scaffold_1530_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1683..2732)
DNA (1050bp) protein (350aa)
Opine dehydrogenase (EC:1.5.1.28) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Opine dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MLQ0_9RHIZ
Opine dehydrogenase
13_1_20cm_2_scaffold_1530_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2729..3922)
DNA (1194bp) protein (398aa)
Formyl-CoA transferase (EC:2.8.3.16); K07749 formyl-CoA transferase [EC:2.8.3.16] Tax=GWA2_Rokubacteria_73_35_curated
Formyl-CoA transferase n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SN40_9CHLR
L-carnitine dehydratase/bile acid-inducible protein F
13_1_20cm_2_scaffold_1530_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3919..6198)
DNA (2280bp) protein (760aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4)
Xanthine dehydrogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4B1_9ARCH
13_1_20cm_2_scaffold_1530_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6355..7950)
DNA (1596bp) protein (532aa)
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1I7_FERPA
13_1_20cm_2_scaffold_1530_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7947..8327)
DNA (381bp) protein (127aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Cobalamin B12-binding domain protein n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YYH1_9THEM
cobalamin B12-binding domain-containing protein
13_1_20cm_2_scaffold_1530_9
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8503..8991)
DNA (489bp) protein (163aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Mas
Phosphodiesterase, MJ0936 family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3M4_VARPE
phosphodiesterase
13_1_20cm_2_scaffold_1530_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8988..9416)
DNA (429bp) protein (143aa)
Putative nucleic-acid-binding protein containing a Zn-ribbon n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KJH8_9FIRM
putative nucleic-acid-binding protein containing a Zn-ribbon Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
putative nucleic-acid-binding protein containing a Zn-ribbon
13_1_20cm_2_scaffold_1530_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9433..10602)
DNA (1170bp) protein (390aa)
Acetyl-CoA acetyltransferase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KDL5_9FIRM
acetyl-CoA acetyltransferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
acetyl-CoA acetyltransferase
13_1_20cm_2_scaffold_1530_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10615..11775)
DNA (1161bp) protein (387aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1I5_FERPA rbh
acyl-CoA dehydrogenase domain protein Tax=GWA2_Rokubacteria_70_23_curated
acyl-CoA dehydrogenase domain protein
13_1_20cm_2_scaffold_1530_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11772..13505)
DNA (1734bp) protein (578aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=halophilic archaeon DL31 RepID=G2MNQ2_9ARCH
13_1_20cm_2_scaffold_1530_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13502..15529)
DNA (2028bp) protein (676aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000372C03D
hyuA; N-methylhydantoinase A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hyuA; N-methylhydantoinase A
13_1_20cm_2_scaffold_1530_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15534..16208)
DNA (675bp) protein (225aa)
Phophonate C-P lyase system transcriptional regulator PhnF, GntR family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CI93_THET1
phophonate C-P lyase system transcriptional regulator PhnF, GntR family; K03710 GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
phophonate C-P lyase system transcriptional regulator PhnF, GntR family
13_1_20cm_2_scaffold_1530_16
unknown

Not on your lists

comp(16322..16690)
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_20cm_2_scaffold_1530_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16840..17703)
DNA (864bp) protein (288aa)
3-hydroxybutyryl-CoA dehydrogenase; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] Tax=GWA2_Rokubacteria_73_35_curated
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B0Y1_HERA2
3-hydroxybutyryl-CoA dehydrogenase
13_1_20cm_2_scaffold_1530_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(17789..18010)
DNA (222bp) protein (74aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_1530_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18082..18606)
DNA (525bp) protein (175aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=GWA2_Rokubacteria_73_35_curated
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CLU3_SYNLT
13_1_20cm_2_scaffold_1530_20
unknown

Not on your lists

18813..19070
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_2_scaffold_1530_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

19102..19452
DNA (351bp) protein (117aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_1530_22
unknown

Not on your lists

19628..19687
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 22 items

View Taxonomy