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13_1_20cm_2_scaffold_2884

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2884_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(35..1489)
DNA (1455bp) protein (485aa)
NUDIX hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NUDIX hydrolase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6P6_GEOUR
NUDIX hydrolase
13_1_20cm_2_scaffold_2884_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1699..2388
DNA (690bp) protein (230aa)
aminopeptidase P (EC:3.4.11.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00036D8C20
Xaa-Pro aminopeptidase
13_1_20cm_2_scaffold_2884_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2400..3587
DNA (1188bp) protein (396aa)
putative acyl-CoA thiolase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acyltransferase/thiolase family protein n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DRK9_9RHOB
13_1_20cm_2_scaffold_2884_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3664..4305)
DNA (642bp) protein (214aa)
MOSC domain containing protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QK31_CATAD
MOSC domain-containing protein; K07140 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
MOSC domain-containing protein
13_1_20cm_2_scaffold_2884_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4525..5232)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B54EA1
hypothetical protein; K07090 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_2884_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5269..6471
DNA (1203bp) protein (401aa)
Major facilitator superfamily MFS_1 n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1V1_DESAP rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
major facilitator transporter
13_1_20cm_2_scaffold_2884_7
unknown

Not on your lists

comp(6443..6766)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_2_scaffold_2884_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6806..7921
DNA (1116bp) protein (372aa)
FMN-dependent alpha-hydroxy acid dehydrogenase glycolate oxidase (EC:1.1.3.15); K00104 glycolate oxidase [EC:1.1.3.15] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IP28_9BRAD
lldA; L-lactate dehydrogenase
13_1_20cm_2_scaffold_2884_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8001..8651
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI00037F416C
Uncharacterized protein {ECO:0000313|EMBL:ETX04304.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
MerR family transcriptional regulator
13_1_20cm_2_scaffold_2884_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8638..9339)
DNA (702bp) protein (234aa)
two-component hybrid sensor and regulator (EC:2.7.3.-)
Two-component hybrid sensor and regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GVN1_SORC5
PAS domain S-box {ECO:0000313|EMBL:CDM67133.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_20cm_2_scaffold_2884_11
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9347..11035)
DNA (1689bp) protein (563aa)
Two-component hybrid sensor and regulator n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EQ6_BRADU
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
two-component hybrid sensor and regulator
13_1_20cm_2_scaffold_2884_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11123..13075)
DNA (1953bp) protein (651aa)
Probable potassium transport system protein kup n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=KUP_ANAD2 rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Low affinity potassium transport system protein kup
13_1_20cm_2_scaffold_2884_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13195..14778
DNA (1584bp) protein (528aa)
AMP-dependent synthetase and ligase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TM31_9CHLR
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AMP-dependent synthetase and ligase
13_1_20cm_2_scaffold_2884_14
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14793..15257
DNA (465bp) protein (155aa)
Amidohydrolase n=1 Tax=Prochloron didemni P1-Palau RepID=G0XS52_PRODI
TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
TIM-barrel fold metal-dependent hydrolase
Displaying 14 items

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