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13_1_20cm_2_scaffold_334

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_334_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..1009)
DNA (1008bp) protein (336aa)
ATPase component of ABC transporter with duplicated ATPase domain n=1 Tax=Eggerthella sp. CAG:209 RepID=R6H911_9ACTN
ABC transporter-like protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter ATPase
13_1_20cm_2_scaffold_334_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1021..1422)
DNA (402bp) protein (134aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Rhodovulum sp. PH10 RepID=J6J348_9RHOB
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=GWA2_Rokubacteria_73_35_curated
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
13_1_20cm_2_scaffold_334_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1578..1763)
DNA (186bp) protein (62aa)
Alkylhydroperoxidase like protein, AhpD family Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_334_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1775..2284)
DNA (510bp) protein (170aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_334_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2287..3699)
DNA (1413bp) protein (471aa)
EmrB/QacA family drug resistance transporter n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SU80_9BACT rbh
EmrB/QacA family drug resistance transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
drug resistance transporter, EmrB/QacA subfamily
13_1_20cm_2_scaffold_334_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3699..4025)
DNA (327bp) protein (109aa)
Putative uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_334_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4022..4942)
DNA (921bp) protein (307aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003795CF1
13_1_20cm_2_scaffold_334_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5041..6861)
DNA (1821bp) protein (607aa)
Amino acid permease-associated region n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IA83_9CHLR
amino acid permease-associated protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_334_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6935..7909)
DNA (975bp) protein (325aa)
aceA; isocitrate lyase (EC:2.7.8.23) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
prpB_2; carboxyvinyl-carboxyphosphonate phosphorylmutase (EC:2.7.8.23)
Isocitrate lyase and phosphorylmutase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4H8K5_9EURY rbh
13_1_20cm_2_scaffold_334_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7927..8079)
DNA (153bp) protein (51aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_334_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8094..8285)
DNA (192bp) protein (64aa)
Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_334_12
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8502..9857)
DNA (1356bp) protein (452aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RG80_9DELT
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:CCO25220.1}; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desu
Sigma-54 factor interaction domain-containing protein
13_1_20cm_2_scaffold_334_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(9996..12635)
DNA (2640bp) protein (880aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=GWA2_Rokubacteria_73_35_curated
Replicative DNA helicase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SS63_9DELT rbh
DNA helicase
13_1_20cm_2_scaffold_334_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(12823..13266)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T2X2_SYNGF
50S ribosomal protein L9 Tax=GWA2_Rokubacteria_73_35_curated
50S ribosomal protein L9
13_1_20cm_2_scaffold_334_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(13532..13942)
DNA (411bp) protein (137aa)
Single-stranded DNA-binding protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3E0Q5_METI4
ssb; Single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ssb; Single-stranded DNA-binding protein
13_1_20cm_2_scaffold_334_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(13942..14322)
DNA (381bp) protein (127aa)
30S ribosomal protein S6 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=RS6_SOLUE
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 Tax=GWA2_Rokubacteria_73_35_curated
rpsF; 30S ribosomal protein S6
13_1_20cm_2_scaffold_334_17
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(14515..16134)
DNA (1620bp) protein (540aa)
60 kDa chaperonin n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJE3_9BACT rbh
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein) Tax=GWA2_Rokubacteria_73_35_curated
groL; 60 kDa chaperonin (Protein Cpn60) (groEL protein)
13_1_20cm_2_scaffold_334_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(16159..16446)
DNA (288bp) protein (96aa)
molecular chaperone GroES n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037BAB75
groS; chaperone Hsp10 (GroES), part of GroE chaperone system Tax=GWA2_Rokubacteria_73_35_curated
groS; chaperone Hsp10 (GroES), part of GroE chaperone system
13_1_20cm_2_scaffold_334_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16612..17514
DNA (903bp) protein (301aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC:1.1.1.26)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YXJ6_9THEM
13_1_20cm_2_scaffold_334_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17546..18592
DNA (1047bp) protein (349aa)
Putative ABC transporter (ATP binding protein) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLS3_9BACT rbh
ABC transporter ATP binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter ATP binding protein
13_1_20cm_2_scaffold_334_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18615..19844)
DNA (1230bp) protein (410aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67NY6_SYMTH
hypothetical protein; K07502 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_334_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19828..22191)
DNA (2364bp) protein (788aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00035D90E4
DEAD/DEAH box helicase; K06877 DEAD/DEAH box helicase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dead/deah box helicase
13_1_20cm_2_scaffold_334_23
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22161..22667)
DNA (507bp) protein (169aa)
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:CAN90781.1}; EC=2.7.3.- {ECO:0000313|EMBL:CAN90781.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; S
two-component hybrid sensor and regulator (EC:2.7.3.-)
Two-component hybrid sensor and regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GVN1_SORC5
13_1_20cm_2_scaffold_334_24
unknown

Not on your lists

comp(22914..23018)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_20cm_2_scaffold_334_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

23067..23792
DNA (726bp) protein (242aa)
Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LXZ1_SYNAS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_334_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23808..24719)
DNA (912bp) protein (304aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dickeya dadantii (strain Ech703) RepID=C6C4Y5_DICDC
binding-protein-dependent transporters inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
binding-protein-dependent transporters inner membrane component
13_1_20cm_2_scaffold_334_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(24716..25204)
DNA (489bp) protein (163aa)
Dipeptide transport system permease DppB n=2 Tax=Oligotropha carboxidovorans RepID=B6JJM3_OLICO
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
dppB; dipeptide transport system permease DppB
Displaying 27 items

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