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13_1_20cm_2_scaffold_3668

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3668_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..300)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JIR7_DESDE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_3668_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(319..903)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00037DCD90
type 11 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
type 11 methyltransferase
13_1_20cm_2_scaffold_3668_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(909..1322)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PA42_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK40101.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_2_scaffold_3668_4
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2033..2635)
DNA (603bp) protein (201aa)
isochorismatase hydrolase; K08281 nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Pyrazinamidase/nicotinamidase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPS2_9BACT
nicotinamidase
13_1_20cm_2_scaffold_3668_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

2766..3896
DNA (1131bp) protein (377aa)
Acetamidase/Formamidase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQ89_METS4
acetamidase/formamidase Tax=CSP1_6_Rokubacteria
acetamidase/formamidase
13_1_20cm_2_scaffold_3668_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

3899..4756
DNA (858bp) protein (286aa)
Periplasmic solute binding protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQ90_METS4
periplasmic solute binding protein; K09815 zinc transport system substrate-binding protein Tax=CSP1_6_Rokubacteria
periplasmic solute binding protein
13_1_20cm_2_scaffold_3668_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

4756..6021
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036376BF
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=CSP1_6_Rokubacteria
ABC-3 protein
13_1_20cm_2_scaffold_3668_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6153..6482)
DNA (330bp) protein (110aa)
Putative lipoprotein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJX3_METPP
transport-associated protein; K04065 hyperosmotically inducible periplasmic protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
lipoprotein
13_1_20cm_2_scaffold_3668_9
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6793..7767
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Salsuginibacillus kocurii RepID=UPI000367ECB1
type 11 methyltransferase Tax=RBG_13_Deltaproteobacteria_61_14_curated
type 11 methyltransferase
13_1_20cm_2_scaffold_3668_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7800..8363)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Vitreoscilla stercoraria RepID=UPI00037841FF
hypothetical protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
13_1_20cm_2_scaffold_3668_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8366..8533)
DNA (168bp) protein (56aa)
class V aminotransferase; K03430 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_3668_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8530..9423)
DNA (894bp) protein (298aa)
Putative aminotransferase n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NA59_KITSK
putative aminotransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative aminotransferase
13_1_20cm_2_scaffold_3668_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9538..9789)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037BE7AD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_3668_14
unknown

Not on your lists

comp(9786..9986)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_2_scaffold_3668_15
unknown

Not on your lists

comp(9983..10102)
DNA (120bp) protein (40aa)

This feature has no annotations

13_1_20cm_2_scaffold_3668_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10099..10494)
DNA (396bp) protein (132aa)
fdhA; formate dehydrogenase, alpha subunit (fdhA2) (EC:1.2.1.2) Tax=GWA2_Rokubacteria_73_35_curated
fdhA; formate dehydrogenase, alpha subunit (fdhA2) (EC:1.2.1.2)
Formate dehydrogenase, alpha subunit (FdhA2) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM28_9BACT
13_1_20cm_2_scaffold_3668_17
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10567..11613)
DNA (1047bp) protein (349aa)
Amino acid or sugar ABC transport system, permease protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F7F7_9DELT
Amino acid or sugar ABC transport system, permease protein {ECO:0000313|EMBL:EFK08295.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
ABC transporter-like protein
13_1_20cm_2_scaffold_3668_18
'Deinococcus soli' Cha et al. 2014, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

11650..12051
DNA (402bp) protein (134aa)
membrane protein n=1 Tax=Brachybacterium squillarum RepID=UPI0002629AD4
Membrane protein {ECO:0000313|EMBL:AKH16233.1}; TaxID=1309411 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et al. 20
hypothetical protein
13_1_20cm_2_scaffold_3668_19
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12337..12666
DNA (330bp) protein (110aa)
Gas vesicle structural protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUD7_PSEUX
Putative gas vesicle synthesis protein {ECO:0000313|EMBL:AKF10198.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;"
gas vesicle protein GVPa
13_1_20cm_2_scaffold_3668_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12670..13011
DNA (342bp) protein (114aa)
Gas vesicle structural protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GVPA_KORVE
Gas vesicle structural protein (GVP) {ECO:0000313|EMBL:AKF10197.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" so
Gas vesicle structural protein
13_1_20cm_2_scaffold_3668_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13015..14052
DNA (1038bp) protein (346aa)
Sensory box histidine kinase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DC18_MYXXD
sensory box histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
sensory box histidine kinase
Displaying 21 items

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