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13_1_20cm_2_scaffold_4317

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4317_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2..508)
DNA (507bp) protein (169aa)
Glycosyl transferase, group 1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CA0_SOLUE
group 1 glycosyl transferase Tax=GWA2_Rokubacteria_73_35_curated
group 1 glycosyl transferase
13_1_20cm_2_scaffold_4317_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(508..1299)
DNA (792bp) protein (264aa)
enoyl-CoA hydratase (EC:4.2.1.-)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P6U5_9BRAD
enoyl-CoA hydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_20cm_2_scaffold_4317_3
unknown

Not on your lists

comp(1296..1550)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_2_scaffold_4317_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1971..2366)
DNA (396bp) protein (132aa)
two-component system sensor protein (EC:2.7.3.-) Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DH44_9BACT
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
13_1_20cm_2_scaffold_4317_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2596..2781
DNA (186bp) protein (62aa)
membrane protein n=1 Tax=Thioalkalivibrio RepID=UPI000374E325
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
small integral membrane protein
13_1_20cm_2_scaffold_4317_6
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2823..3038
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI00036AB1C7
General stress protein CsbD {ECO:0000313|EMBL:KGF30985.1}; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella urethralis
CsbD-like protein
13_1_20cm_2_scaffold_4317_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3420..3665
DNA (246bp) protein (82aa)
Uncharacterized protein (Fragment) n=1 Tax=Leptospira interrogans serovar Pomona str. Fox 32256 RepID=M3DG72_LEPIR
unclassified Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA-directed RNA polymerase subunit delta
13_1_20cm_2_scaffold_4317_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3694..4419
DNA (726bp) protein (242aa)
transcription antitermination protein NusG n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI0003822357
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_4317_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4484..4816)
DNA (333bp) protein (111aa)
Cytochrome C n=1 Tax=Leptospira fainei serovar Hurstbridge str. BUT 6 RepID=S3UWT2_9LEPT
lipoprotein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lipoprotein
13_1_20cm_2_scaffold_4317_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4813..5394)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P876_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_4317_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5391..6665)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXW1_SULAD
glpC; ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_4317_12
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(6814..7263)
DNA (450bp) protein (150aa)
Rubrerythrin n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P878_9BACT
rbr; rubrerythrin Tax=CSP1_6_Rokubacteria
rbr; rubrerythrin
13_1_20cm_2_scaffold_4317_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7235..7744)
DNA (510bp) protein (170aa)
Ferric-uptake regulator n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W4C7_DESIS
FUR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ferric-uptake regulator
13_1_20cm_2_scaffold_4317_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7837..8217)
DNA (381bp) protein (127aa)
histidine kinase; K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Histidine kinase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NY93_AROAE
histidine kinase
13_1_20cm_2_scaffold_4317_15
unknown

Not on your lists

comp(8220..8537)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_2_scaffold_4317_16
unknown

Not on your lists

comp(8534..8944)
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_20cm_2_scaffold_4317_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9079..9987)
DNA (909bp) protein (303aa)
Sigma-54-dependent transcriptional response regulator n=2 Tax=Geobacter metallireducens RepID=Q39SU6_GEOMG alias=16ft_combo_ws3_scaffold_427_3 id=5224976 tax=16ft_combo_ws3 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
two component sigma54 specific Fis family transcriptional regulator
Displaying 17 items

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