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13_1_20cm_2_scaffold_4410

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4410_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..108
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK67_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_4410_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

113..382
DNA (270bp) protein (90aa)
UPF0176 protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_20cm_2_scaffold_4410_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

514..2073
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK66_9BACT
hypothetical protein
Tax=CSP1_6_Rokubacteria
13_1_20cm_2_scaffold_4410_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

2073..2990
DNA (918bp) protein (306aa)
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] Tax=CSP1_6_Rokubacteria
Transketolase domain-containing protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V713_THELD
transketolase
13_1_20cm_2_scaffold_4410_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3002..3928
DNA (927bp) protein (309aa)
transketolase central region; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
transketolase subunit B (EC:2.2.1.1)
transketolase n=1 Tax=Anaeromusa acidaminophila RepID=UPI000373AE15
13_1_20cm_2_scaffold_4410_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3961..4758)
DNA (798bp) protein (266aa)
ABC-2 type transporter n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B647_METTP
ABC transporter; K09686 antibiotic transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
ABC-2 type transporter
13_1_20cm_2_scaffold_4410_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4739..5674)
DNA (936bp) protein (312aa)
polyamine-transporting ATPase (EC:3.6.3.31); K09687 antibiotic transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
polyamine-transporting ATPase (EC:3.6.3.31)
Polyamine-transporting ATPase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJU1_DESAR
13_1_20cm_2_scaffold_4410_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

5679..5993
DNA (315bp) protein (105aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Variovorax sp. CF313 RepID=J3CTZ1_9BURK
Rieske (2Fe-2S) protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
rieske [2Fe-2S] domain-containing protein
13_1_20cm_2_scaffold_4410_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5990..6397
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PC53_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_4410_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6431..7213
DNA (783bp) protein (261aa)
coenzyme A transferase; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Coenzyme A transferase n=2 Tax=Sulfobacillus acidophilus RepID=G8U051_SULAD
coenzyme A transferase
13_1_20cm_2_scaffold_4410_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7237..7878
DNA (642bp) protein (214aa)
putative CoA transferase subunit B; K01040 glutaconate CoA-transferase, subunit B [EC:2.8.3.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Coenzyme A transferase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDT3_9FIRM
coenzyme A transferase
13_1_20cm_2_scaffold_4410_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7951..8733)
DNA (783bp) protein (261aa)
Glycosyl transferase n=1 Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GK90_9CYAN
glycosyl transferase family protein Tax=GWA2_Rokubacteria_73_35_curated
glycosyl transferase family protein
13_1_20cm_2_scaffold_4410_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8760..10490)
DNA (1731bp) protein (577aa)
Glycosyl transferase, family 39 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKQ4_SYNFM
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glycosyl transferase family protein
13_1_20cm_2_scaffold_4410_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10500..11192)
DNA (693bp) protein (231aa)
hypothetical protein; K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein n=1 Tax=Prochlorothrix hollandica RepID=UPI00034B2329
coenzyme PQQ synthesis protein C
13_1_20cm_2_scaffold_4410_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11213..11941)
DNA (729bp) protein (243aa)
molybdopterin binding domain-containing protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262738C
molybdopterin binding domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
molybdopterin binding domain-containing protein
13_1_20cm_2_scaffold_4410_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11991..12779
DNA (789bp) protein (263aa)
undecaprenyl pyrophosphate phosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
uppP; UDP pyrophosphate phosphatase (EC:3.6.1.27)
hypothetical protein n=1 Tax=Pseudomonas luteola RepID=UPI0002DF197E
13_1_20cm_2_scaffold_4410_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12776..13807
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B70829
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
thiol-disulfide oxidoreductase domain-containing protein
13_1_20cm_2_scaffold_4410_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(14111..15469)
DNA (1359bp) protein (453aa)
Secretion protein HlyD family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NG8_SOLUE
secretion protein HlyD family protein Tax=CSP1_6_Rokubacteria
secretion protein HlyD family protein
13_1_20cm_2_scaffold_4410_19
unknown

Not on your lists

comp(15669..15812)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_20cm_2_scaffold_4410_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15809..16528)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LFF1_SYNFM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_4410_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16679..17464)
DNA (786bp) protein (262aa)
TatD-related deoxyribonuclease; K03424 TatD DNase family protein [EC:3.1.21.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Deoxyribonuclease n=1 Tax=Desmospora sp. 8437 RepID=F5SJ82_9BACL
deoxyribonuclease
13_1_20cm_2_scaffold_4410_22
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(17480..18826)
DNA (1347bp) protein (449aa)
Peptidase U62 n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4U4_9BACT
pmbA; protease pmbA; K03592 PmbA protein Tax=GWA2_Rokubacteria_73_35_curated
pmbA; protease pmbA
13_1_20cm_2_scaffold_4410_23
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(18823..19842)
DNA (1020bp) protein (340aa)
Putative peptidase TldD n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLM5_9BACT
tldD; peptidase TldD Tax=GWA2_Rokubacteria_73_35_curated
tldD; peptidase TldD
Displaying 23 items

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