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13_1_20cm_2_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_85_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(271..1584)
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381993F
rho; transcription termination factor Rho; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
transcription termination factor Rho
13_1_20cm_2_scaffold_85_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1720..2787)
DNA (1068bp) protein (356aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00036FEBB4
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_20cm_2_scaffold_85_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2784..5990)
DNA (3207bp) protein (1069aa)
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRU9_9FIRM
13_1_20cm_2_scaffold_85_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6179..6829)
DNA (651bp) protein (217aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKE0_9BACT
rex; redox-sensing transcriptional repressor rex Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rex; redox-sensing transcriptional repressor rex
13_1_20cm_2_scaffold_85_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7178..7960)
DNA (783bp) protein (261aa)
ATP synthase subunit A (EC:3.6.3.14) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF3_9BACT
13_1_20cm_2_scaffold_85_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7963..8331)
DNA (369bp) protein (123aa)
id=14625923 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_20cm_2_scaffold_85_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8324..8557)
DNA (234bp) protein (78aa)
ATP synthase-associated magnesium import membrane protein AtpZ n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A8L6_PELCD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
magnesium transporter
13_1_20cm_2_scaffold_85_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8667..10364)
DNA (1698bp) protein (566aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LP16_SYNFM
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
binding-protein-dependent transport system inner membrane protein
13_1_20cm_2_scaffold_85_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10357..11418)
DNA (1062bp) protein (354aa)
ABC transporter related n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LP15_SYNFM
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=CSP1_6_Rokubacteria
ABC transporter-like protein
13_1_20cm_2_scaffold_85_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11482..12594)
DNA (1113bp) protein (371aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LP14_SYNFM rbh
extracellular solute-binding protein Tax=GWA2_Rokubacteria_70_23_curated
extracellular solute-binding protein
13_1_20cm_2_scaffold_85_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(12668..14170)
DNA (1503bp) protein (501aa)
glycerol kinase (EC:2.7.1.30); K00864 glycerol kinase [EC:2.7.1.30] Tax=GWA2_Rokubacteria_73_35_curated
Glycerol kinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BCP9_MEISD
glycerol kinase
13_1_20cm_2_scaffold_85_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14167..14997)
DNA (831bp) protein (277aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TKN1_9CHLR
glycerophosphodiester phosphodiesterase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glycerophosphodiester phosphodiesterase
13_1_20cm_2_scaffold_85_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14994..15794)
DNA (801bp) protein (267aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A747_9PROT
glycerophosphodiester phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glycerophosphodiester phosphodiesterase
13_1_20cm_2_scaffold_85_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15795..15893)
DNA (99bp) protein (33aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036978D9
ugpE2; sn-glycerol-3-phosphate transport system permease; K05815 sn-glycerol 3-phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ugpE; sn-glycerol 3-phosphate transport system permease; K05815 sn-glycerol 3-phosphate transport system permease protein
13_1_20cm_2_scaffold_85_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(15890..16345)
DNA (456bp) protein (152aa)
glycerol-3-phosphate transporter membrane protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002DDAA1F
ugpE2; sn-glycerol-3-phosphate transport system permease; K05815 sn-glycerol 3-phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ugpE; sn-glycerol-3-phosphate transporter permease protein UgpE
13_1_20cm_2_scaffold_85_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(16342..17961)
DNA (1620bp) protein (540aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
FAD dependent oxidoreductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEN6_THET1
FAD dependent oxidoreductase
13_1_20cm_2_scaffold_85_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(17958..18749)
DNA (792bp) protein (264aa)
Phosphoglycolate phosphatase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKA8_ROSCS
had-superfamily hydrolase, subfamily iia; K02566 NagD protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
phosphoglycolate phosphatase
13_1_20cm_2_scaffold_85_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(18746..19231)
DNA (486bp) protein (162aa)
CoA-transferase (EC:2.8.3.-)
CoA-transferase family III family protein 31 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HV02_ACHXA
L-carnitine dehydratase/bile acid-inducible protein F Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_85_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19318..20772)
DNA (1455bp) protein (485aa)
nuoN-1; NADH dehydrogenase I subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH-quinone oxidoreductase subunit N n=2 Tax=Geobacter sulfurreducens RepID=D7AE98_GEOSK
nuoN-1; NADH dehydrogenase I subunit N
13_1_20cm_2_scaffold_85_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20769..22295)
DNA (1527bp) protein (509aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Similar to NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PWH2_9BACT
13_1_20cm_2_scaffold_85_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(22292..24166)
DNA (1875bp) protein (625aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6X7_SPHTD
13_1_20cm_2_scaffold_85_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24217..25635
DNA (1419bp) protein (473aa)
Peptidase M23 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGL9_DESAR
peptidase M23 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
peptidase M23
13_1_20cm_2_scaffold_85_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(25753..26418)
DNA (666bp) protein (222aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HNA0_9EURY
dimethylmenaquinone methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dimethylmenaquinone methyltransferase
13_1_20cm_2_scaffold_85_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(26492..27694)
DNA (1203bp) protein (401aa)
Putative Electron transfer oxidoreductase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA4_9BACT
Electron transfer oxidoreductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Electron transfer oxidoreductase
13_1_20cm_2_scaffold_85_25
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(27691..28365)
DNA (675bp) protein (225aa)
Methyltransferase type 11 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2H6_SPHTD
SAM-dependent methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase type 11
13_1_20cm_2_scaffold_85_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(28489..29514)
DNA (1026bp) protein (342aa)
Putative Chalcone and stilbene synthase domain protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLA6_9BACT
Chalcone and stilbene synthase domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Chalcone and stilbene synthase domain protein
13_1_20cm_2_scaffold_85_27
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

29588..30118
DNA (531bp) protein (177aa)
Carbonic anhydrase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WPJ3_MYCKA
carbonic anhydrase Tax=GWA2_Rokubacteria_70_23_curated
carbonic anhydrase
13_1_20cm_2_scaffold_85_28
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

30115..30810
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TCE3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89960.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_20cm_2_scaffold_85_29
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

30816..31397
DNA (582bp) protein (194aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Bacillus methanolicus PB1 RepID=I3DW57_BACMT
ThiJ/PfpI domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ThiJ/PfpI domain-containing protein
13_1_20cm_2_scaffold_85_30
unknown

Not on your lists

comp(31507..31779)
DNA (273bp) protein (91aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

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