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13_1_20cm_2_scaffold_892

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_892_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3..269
DNA (267bp) protein (89aa)
Putative ABC transporter related n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z5R4_9ACTN
ABC transporter-like protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ydiF; ABC transporter ATP-binding protein; K06158 ATP-binding cassette, subfamily F, member 3
13_1_20cm_2_scaffold_892_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

262..567
DNA (306bp) protein (102aa)
HNH endonuclease family protein n=2 Tax=Geobacter metallireducens RepID=Q39X46_GEOMG
HNH endonuclease family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
HNH endonuclease family protein
13_1_20cm_2_scaffold_892_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

675..980
DNA (306bp) protein (102aa)
Competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CGX5_DESK7
helix-hairpin-helix repeat-containing competence protein ComEA; K02237 competence protein ComEA Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
competence protein ComEA
13_1_20cm_2_scaffold_892_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1427..1627)
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=4 Tax=Anaeromyxobacter RepID=B4UH01_ANASK alias=16ft_combo_ws3_scaffold_2317_17 id=5224528 tax=16ft_combo_ws3 species=Anaeromyxobacter genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family) Tax=GWA2_Rokubacteria_70_23_curated
cold-shock DNA-binding protein family protein
13_1_20cm_2_scaffold_892_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2271..3095)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378C7E
thiol-disulfide oxidoreductase domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
13_1_20cm_2_scaffold_892_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

3408..3872
DNA (465bp) protein (155aa)
3-isopropylmalate dehydratase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=CSP1_6_Rokubacteria
homoaconitate hydratase family protein (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Desulfurispora thermophila RepID=UPI000374E7C7
13_1_20cm_2_scaffold_892_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

3875..4321
DNA (447bp) protein (149aa)
3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=CSP1_6_Rokubacteria
3-isopropylmalate dehydratase small subunit n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZZQ6_MAHA5
3-isopropylmalate dehydratase small subunit
13_1_20cm_2_scaffold_892_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4455..5525
DNA (1071bp) protein (357aa)
Rod shape-determining protein MreB n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5H1_GEOUR
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rod shape-determining protein MreB
13_1_20cm_2_scaffold_892_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5556..6392
DNA (837bp) protein (279aa)
Cell shape-determining protein MreC n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN63_9BACT
rod shape-determining protein MreC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Rod shape-determining protein MreC
13_1_20cm_2_scaffold_892_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6398..6886
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RL20_MOOTA
hypothetical protein; K03571 rod shape-determining protein MreD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_892_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6883..8709
DNA (1827bp) protein (609aa)
Penicillin-binding protein 2 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN65_9BACT rbh
mrdA; penicillin-binding protein 2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
mrdA; penicillin-binding protein 2
13_1_20cm_2_scaffold_892_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8786..9880
DNA (1095bp) protein (365aa)
Rod shape-determining protein RodA n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDJ6_DESAR
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rod shape-determining protein RodA
13_1_20cm_2_scaffold_892_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9936..11465
DNA (1530bp) protein (510aa)
cafA; ribonuclease G; K08301 ribonuclease G [EC:3.1.26.-] Tax=GWA2_Rokubacteria_73_35_curated
Ribonuclease, Rne/Rng family n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWI5_DESAC
ribonuclease, Rne/Rng family
13_1_20cm_2_scaffold_892_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11819..12232
DNA (414bp) protein (138aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_892_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12319..12600
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHM5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_892_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12609..14837
DNA (2229bp) protein (743aa)
actP; copper-transporting P-type ATPase (EC:3.6.3.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
copA; Cu(2+)-binding/translocating P-type ATPase (EC:3.6.3.4)
ATPase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B7A92F
13_1_20cm_2_scaffold_892_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14849..14998
DNA (150bp) protein (50aa)
YHS domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
YHS domain-containing protein alias=scaffold_4_44,RBG2_C00004G00044 id=1241733 tax=RBG2 species=Methanosaeta thermophila genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota
YHS domain-containing protein
13_1_20cm_2_scaffold_892_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15390..16322)
DNA (933bp) protein (311aa)
glutamate formiminotransferase (EC:2.1.2.5); K00603 glutamate formiminotransferase [EC:2.1.2.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUX1_SYNAS
13_1_20cm_2_scaffold_892_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

16327..17292
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00036E31A9
AIR synthase-like protein Tax=GWA2_Rokubacteria_73_35_curated
AIR synthase-like protein domain-containing protein
13_1_20cm_2_scaffold_892_20
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

17297..18895
DNA (1599bp) protein (533aa)
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=GWA2_Rokubacteria_73_35_curated
ggt; gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYQ4_THERP
13_1_20cm_2_scaffold_892_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

18901..19404
DNA (504bp) protein (168aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_892_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(19355..20743)
DNA (1389bp) protein (463aa)
1,4-alpha-glucan branching protein; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003736AC0
1,4-alpha-glucan branching protein
13_1_20cm_2_scaffold_892_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(20718..22391)
DNA (1674bp) protein (558aa)
Trehalose synthase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2L5_HERA2 rbh
trehalose synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
trehalose synthase
13_1_20cm_2_scaffold_892_24
unknown

Not on your lists

22667..22990
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_20cm_2_scaffold_892_25
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22975..23376
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037B16D0
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
hypothetical protein
13_1_20cm_2_scaffold_892_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(23410..25362)
DNA (1953bp) protein (651aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1U4_CORCM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_892_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(25362..25715)
DNA (354bp) protein (118aa)
Glycosyl transferase, family 2 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR8_9BACT
glycosyl transferase Tax=GWA2_Rokubacteria_73_35_curated
glycosyl transferase
Displaying 27 items

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