ggKbase home page

13_1_20cm_2_scaffold_295_3

Organism: 13_1_20CM_2_Rokubacteria_70_7

partial RP 17 / 55 MC: 1 BSCG 11 / 51 ASCG 7 / 38
Location: comp(1588..2205)

Top 3 Functional Annotations

Value Algorithm Source
ligD; ATP-dependent DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 196.0
  • Bit_score: 239
  • Evalue 3.60e-60
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAS9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 52.1
  • Coverage: 213.0
  • Bit_score: 212
  • Evalue 5.60e-52
ATP dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 194.0
  • Bit_score: 206
  • Evalue 6.80e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 618
ATGGCGAACGTCGCGCTCGAGCGGTACCGGACCAAGCGGCGCTTCGAGAAGACGCCTGAGCCCGCGCCGCGGCGGCGGAGGTCGACGTCCGGCCAACTCTTCGTCGTTCAGAAGCATCGGGCCCGCCAGCTCCACTACGACTTCCGGCTCGAGGCCGGCGGCGTCCTGAAATCCTGGTCGGTCCCCAAGGGGCCCGCGCTGGACCCCGCCGTCAAGAGGTTCGCGGTGGCGGTGGAGGACCACCCCGTCGACTATGCGGGGTTCGAGGGCATCATCCCGGAGGGCGAGTACGGGGGCGGCACGGTGATGGTGTGGGATCGCGGCACCTACCGGCCGGTCGACGGAACGGATGTCGCCGCCGCCCTCCGGAAGGACCAGCTCACGTTCACGCTGCAGGGCCGGAAGCTCAAGGGAGGCTGGACCCTCCTCCGCCTCCGCGGTCGCCACTGGCTCCTGATCAAGCGCCGCGACCGCTACGCCTCCACCAGGGACATCGCCGTGTCCGCGCCCACGTCCATGCTGACCGGGCGCACCCTCGCGCAGATCGCCGCCGACGAGGGAGGCGACGTCGCCAAGGCGGCATCCGGCGATCCCCCGAAGAGTGCGCGCCGACGATGA
PROTEIN sequence
Length: 206
MANVALERYRTKRRFEKTPEPAPRRRRSTSGQLFVVQKHRARQLHYDFRLEAGGVLKSWSVPKGPALDPAVKRFAVAVEDHPVDYAGFEGIIPEGEYGGGTVMVWDRGTYRPVDGTDVAAALRKDQLTFTLQGRKLKGGWTLLRLRGRHWLLIKRRDRYASTRDIAVSAPTSMLTGRTLAQIAADEGGDVAKAASGDPPKSARRR*