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13_1_20cm_2_scaffold_21635

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_21635_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..1218)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00035D90E4
DEAD/DEAH box helicase; K06877 DEAD/DEAH box helicase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DEAD/DEAH box helicase
13_1_20cm_2_scaffold_21635_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1259..1507)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJU6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_21635_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1627..2220
DNA (594bp) protein (198aa)
Hypothetical membrane protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LXZ1_SYNAS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_21635_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2350..3129)
DNA (780bp) protein (260aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Dickeya dadantii (strain Ech703) RepID=C6C4Y5_DICDC
binding-protein-dependent transporters inner membrane component; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
binding-protein-dependent transporters inner membrane component
13_1_20cm_2_scaffold_21635_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3376..4293)
DNA (918bp) protein (306aa)
Dipeptide transport system permease DppB n=2 Tax=Oligotropha carboxidovorans RepID=B6JJM3_OLICO
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
dppB; dipeptide transport system permease DppB
13_1_20cm_2_scaffold_21635_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4290..5765)
DNA (1476bp) protein (492aa)
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=GWC2_Rokubacteria_70_16_curated
RNA methyltransferase, TrmA family n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XR29_9BACT
RNA methyltransferase
13_1_20cm_2_scaffold_21635_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5818..6288
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M586_GEODF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_21635_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6285..8030
DNA (1746bp) protein (582aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKZ6_DESB2
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_21635_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8047..8763
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A3E5_PELCD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein
13_1_20cm_2_scaffold_21635_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8779..9696
DNA (918bp) protein (306aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=ISPE_PELTS
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
13_1_20cm_2_scaffold_21635_trna_1
unknown

Not on your lists

9711..9789
DNA (79bp)
transferRNA
13_1_20cm_2_scaffold_21635_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9805..10743
DNA (939bp) protein (313aa)
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
prs; ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK00_9BACT
13_1_20cm_2_scaffold_21635_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


10766..10918
DNA (153bp) protein (51aa)
50S ribosomal protein L25 n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T4D5_THEA1
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25
Displaying 13 items

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