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13_1_20cm_2_scaffold_3394

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3394_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2..517)
DNA (516bp) protein (172aa)
oxygen-independent coproporphyrinogen III oxidase (yggW) (EC:1.3.99.22) Tax=GWA2_Rokubacteria_73_35_curated
Coproporphyrinogen-III oxidase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P1K4_9FIRM
oxygen-independent coproporphyrinogen III oxidase
13_1_20cm_2_scaffold_3394_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(544..1251)
DNA (708bp) protein (236aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JYL4_DESFR
13_1_20cm_2_scaffold_3394_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1254..3044)
DNA (1791bp) protein (597aa)
Elongation factor 4 n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WY50_ALIAD
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GTP-binding protein LepA
13_1_20cm_2_scaffold_3394_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3101..4186)
DNA (1086bp) protein (362aa)
nucleotidyl transferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=GWA2_Rokubacteria_73_35_curated
Nucleotidyl transferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NP37_ROSCS
nucleotidyl transferase
13_1_20cm_2_scaffold_3394_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4186..4356)
DNA (171bp) protein (57aa)
UPF0434 protein trd_0719 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZ10_THERP
hypothetical protein; K09791 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_3394_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4353..5348)
DNA (996bp) protein (332aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWA2_Rokubacteria_73_35_curated
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08N31_STIAD
13_1_20cm_2_scaffold_3394_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(5345..6280)
DNA (936bp) protein (312aa)
NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
UDP-glucuronate decarboxylase (EC:4.1.1.35)
UDP-glucuronate decarboxylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHW9_RHOMR
13_1_20cm_2_scaffold_3394_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6289..7599)
DNA (1311bp) protein (437aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVX9_9BACT
13_1_20cm_2_scaffold_3394_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(7610..8431)
DNA (822bp) protein (274aa)
Putative CtaG protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P0_GEMAT
ctaG; putative CtaG protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein
13_1_20cm_2_scaffold_3394_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(8481..8765)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI0003635062
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_20cm_2_scaffold_3394_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8777..11056)
DNA (2280bp) protein (760aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=GWA2_Rokubacteria_73_35_curated
ctaD; cytochrome c oxidase subunit 1 (EC:1.9.3.1)
UPI0003D6AADF related cluster n=1 Tax=unknown RepID=UPI0003D6AADF
13_1_20cm_2_scaffold_3394_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11759..12004
DNA (246bp) protein (82aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_20cm_2_scaffold_3394_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12190..13428)
DNA (1239bp) protein (413aa)
hydantoinase/carbamoylase amidase (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hydantoinase/carbamoylase amidase (EC:3.5.1.87)
Amidase, hydantoinase/carbamoylase family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV55_9GAMM
13_1_20cm_2_scaffold_3394_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

13522..14712
DNA (1191bp) protein (397aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBJ4_9ACTN
acyl-CoA dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acyl-CoA dehydrogenase
13_1_20cm_2_scaffold_3394_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

14715..15407
DNA (693bp) protein (231aa)
putative acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
dal:Dalk_4172 acyl-CoA dehydrogenase domain protein alias=scaffold_2_63,RBG2_C00002G00063 id=1241345 tax=RBG2 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria
acdA; acyl-CoA dehydrogenase
Displaying 15 items

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