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13_1_20cm_2_scaffold_3845

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3845_trna_2
unknown

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comp(1..82)
DNA (82bp)
transferRNA
13_1_20cm_2_scaffold_3845_trna_1
unknown

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comp(123..194)
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_3845_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(234..986)
DNA (753bp) protein (251aa)
rRNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rRNA methylase, putative, group 3 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M394_CLOCD
rRNA methylase, putative, group 3
13_1_20cm_2_scaffold_3845_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(983..2377)
DNA (1395bp) protein (465aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cysteine--tRNA ligase n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=SYC_GEOSL
cysS; cysteinyl-tRNA ligase
13_1_20cm_2_scaffold_3845_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2374..2853)
DNA (480bp) protein (160aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] Tax=GWA2_Rokubacteria_73_35_curated
Bifunctional enzyme IspD/IspF n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTI4_9FIRM
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13_1_20cm_2_scaffold_3845_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2850..3530)
DNA (681bp) protein (227aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60); K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B2EBDB
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13_1_20cm_2_scaffold_3845_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3523..4542)
DNA (1020bp) protein (340aa)
PilT protein domain protein n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLF3_THEM7
hypothetical protein Tax=CSP1_6_Rokubacteria
PilT protein domain-containing protein
13_1_20cm_2_scaffold_3845_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4564..5931)
DNA (1368bp) protein (456aa)
DNA repair protein radA n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A0V8_PELCD rbh
radA; DNA repair protein RadA; K04485 DNA repair protein RadA/Sms Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
radA; DNA repair protein RadA
13_1_20cm_2_scaffold_3845_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5912..7102)
DNA (1191bp) protein (397aa)
Putative Mce family protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK82_9BACT
Mce family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Mce family protein
13_1_20cm_2_scaffold_3845_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7151..7894)
DNA (744bp) protein (248aa)
ABC transporter ATP-binding component n=1 Tax=planctomycete KSU-1 RepID=I3IJ78_9PLAN
ABC transporter ATPase; K02065 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter
13_1_20cm_2_scaffold_3845_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7901..8014)
DNA (114bp) protein (38aa)
yrbE; toluene ABC transporter subunit membrane protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
yrbE; toluene ABC transporter subunit membrane protein
Displaying 11 items

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