ggKbase home page

13_1_20cm_2_scaffold_3975

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3975_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..1419
DNA (1419bp) protein (473aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C906_SPHTD
13_1_20cm_2_scaffold_3975_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1523..2461)
DNA (939bp) protein (313aa)
id=4814771 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_3975_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2582..3790)
DNA (1209bp) protein (403aa)
acetoacetate metabolism regulatory protein AtoC n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B6CC3F
acetoacetate metabolism regulatory protein AtoC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Fis family two component sigma-54 specific transcriptional regulator
13_1_20cm_2_scaffold_3975_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

3992..4321
DNA (330bp) protein (110aa)
LACA THIOREDOXIN n=1 Tax=synthetic construct RepID=UPI00038A5F38
trxA; thioredoxin 1, redox factor Tax=GWC2_Rokubacteria_70_16_curated
trxA; thioredoxin 1, redox factor
13_1_20cm_2_scaffold_3975_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4424..5878
DNA (1455bp) protein (485aa)
anthranilate synthase component I (EC:4.1.3.27); K01657 anthranilate synthase component I [EC:4.1.3.27] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
trpE; anthranilate synthase, component I (EC:4.1.3.27)
Fragment of Anthranilate synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFE8_9BACT
13_1_20cm_2_scaffold_3975_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5875..6447
DNA (573bp) protein (191aa)
trpG; anthranilate synthase component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
anthranilate synthase subunit II n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F46C9B
glutamine amidotransferase
13_1_20cm_2_scaffold_3975_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6444..7460
DNA (1017bp) protein (339aa)
thiamine-monophosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Thiamine-monophosphate kinase n=2 Tax=Geobacter metallireducens RepID=Q39QP8_GEOMG
thiL; thiamin monophosphate kinase
13_1_20cm_2_scaffold_3975_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7457..8734
DNA (1278bp) protein (426aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRE1_9BACT rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_3975_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8737..9978
DNA (1242bp) protein (414aa)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I928_SULAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_3975_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9981..10655
DNA (675bp) protein (225aa)
dienelactone hydrolase-like enzyme (EC:3.1.1.45); K01061 carboxymethylenebutenolidase [EC:3.1.1.45] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Dienelactone hydrolase-like enzyme n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEN1_CHLTF
Dienelactone hydrolase family
13_1_20cm_2_scaffold_3975_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(10780..11253)
DNA (474bp) protein (158aa)
50S ribosomal protein L17 n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=RL17_DESOH
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rplQ; 50S ribosomal protein L17
13_1_20cm_2_scaffold_3975_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11250..11351)
DNA (102bp) protein (34aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Displaying 12 items

View Taxonomy